| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NZ_CP009273 | 1,902,978 | (AAGC)2→1 | coding (43‑46/144 nt) | mgrB ← | PhoP/PhoQ regulator MgrB |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NZ_CP009273 | 1902971 | 1902974 | 4 | 18 [0] | [0] 18 | mgrB | PhoP/PhoQ regulator MgrB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 1902975 = | 0 (0.000) | 15 (0.600) | 15/152 | 0.4 | 100% | coding (49/144 nt) | mgrB | PhoP/PhoQ regulator MgrB |
| ? | NZ_CP009273 | = 1902970 | 0 (0.000) | coding (54/144 nt) | mgrB | PhoP/PhoQ regulator MgrB | |||||
ACCACGGGATAAACTGGTTAATGGCACAAATTCCGCTGAAAAATTGTACATCCTGATCGCACATCATGTTGAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATG > NZ_CP009273/1902882‑1903050 | accacGGGATAAACTGGTTAATGGCACAAATTCCGCTGAAAAATTGTACATCCTGATCGCACATCATGTTGAATACCTGCGCCCAAAGCa > 1:631645‑M2/1‑89 (MQ=255) cacGGGATAAACTGGTTAATGGCACAAATTCCGCTGAAAAATTGTACATCCTGATCGCACATCATGTTGAATACCTGCGCCCAAAGCagc > 1:635773‑M2/1‑87 (MQ=255) cacGGGATAAACTGGTTAATGGCACAAATTCCGCTGAAAAATTGTACATCCTGATCGCACATCATGTTGAATACCTGCGCCCAAAGCagc > 1:469450‑M2/1‑87 (MQ=255) aCTGGTTAATGGCACAAATTCCGCTGAAAAATTGTACATCCTGATCGCACATCATGTTGAATACCTGCGCCCAAAGCagcaagccaacac > 1:284687‑M2/1‑77 (MQ=255) ggTTAATGGCACAAATTCCGCTGAAAAATTGTACATCCTGATCGCACATCATGTTGAATACCTGCGCCCAAAGCagcaagccaacaccac < 1:607651‑M2/90‑17 (MQ=255) gTTAATGGCACAAATTCCGCTGAAAAATTGTACATCCTGATCGCACATCATGTTGAATACCTGCGCCCAAAGCagcaagccaacaccacg < 2:448163‑M2/90‑18 (MQ=255) ttAATGGCACAAATTCCGCTGAAAAATTGTACATCCTGATCGCACATCATGTTGAATACCTGCGCCCAAAGCagcaagccaacaccacga > 2:142004‑M2/1‑72 (MQ=255) aaaTTCCGCTGAAAAATTGTACATCCTGATCACACATCATGTTGAATACCTGCGCCCAAAGCagcaagccaacaccacgacaaccagaac > 1:228800‑M2/1‑62 (MQ=255) tCCTGATCGCACATCATGTTGAATACCTGCGCCCAAAGCagcaagccaacaccacgacaaccagaacgacccatcgaaactttttcactc < 2:715858‑M2/90‑52 (MQ=255) acaTCATGTTGAATACCTGCGCCCAAAGCagcaagccaacaccacgacaaccagaacgacccatcgaaactttttcactccaatctccgt < 2:140153‑M2/90‑62 (MQ=255) catcatGTTGAATACCTGCGCCCAAAGCagcaagccaacaccacgacaaccagaacgacccatcgaaactttttcactccaatctccgtt > 1:463098‑M2/1‑28 (MQ=255) gTTGAATACCTGCGCCCAAAGCagcaagccaacaccacgacaaccagaacgacccatcgaaactttttcactccaatctccgtttcacct > 2:490682‑M2/1‑22 (MQ=255) aTACCTGCGCCCAAAGCagcaagccaacaccacgacaaccagaacgacccatcgaaactttttcactccaatctccgtttcacctacctt < 1:753778‑M2/90‑74 (MQ=255) ccTGCGCCCAAAGCagcaagccaacaccacgacaaccagaacgacccatcgaaacttttttactccaatctccgtttcacctaccttatg < 1:59497‑M2/90‑77 (MQ=255) ccTGCGCCCAAAGCagcaagccaacaccacgacaaccagaacgacccatcgaaactttttcactccaatctccgtttcacctaccttatg > 1:448163‑M2/1‑14 (MQ=255) tGCGCCCAAAGCagcaagccaacaccacgacaaccagaacgacccatcgaaactttttcactccaatctccgtttcacc < 1:94462‑M2/79‑68 (MQ=255) tGCGCCCAAAGCagcaagccaacaccacgacaaccagaacgacccatcgaaactttttcactccaatctccgtttcacc > 2:94462‑M2/1‑12 (MQ=255) cgcCCAAAGCagcaagccaacaccacgacaaccagaacgacccatcgaaactttttcactccaatctccgtttcacctaccttatgtcat > 1:183911‑M2/1‑10 (MQ=255) | ACCACGGGATAAACTGGTTAATGGCACAAATTCCGCTGAAAAATTGTACATCCTGATCGCACATCATGTTGAATACCTGCGCCCAAAGCAGCAAGCAAGCCAACACCACGACAACCAGAACGACCCATCGAAACTTTTTCACTCCAATCTCCGTTTCACCTACCTTATG > NZ_CP009273/1902882‑1903050 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |