| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 290186 = | 39 (1.670) | 9 (0.390) | 7/162 | 1.0 | 19.1% | coding (325/855 nt) | BW25113_RS01425 | hypothetical protein |
| ? | NZ_CP009273 | 376718 = | NA (NA) | coding (26/444 nt) | BW25113_RS01855 | transferase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AATGCAATCGTCATAACTGGTCAATAAATGAAATAAAAAATGACCTGTTAAAGTTCTCTATAAAAGAAAGCATCAATCGAAGCCGAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/290275‑290186‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAG > NZ_CP009273/376718‑376806 AATGCAATCGTCATAACTGGTCAATAAATGAAATAAAAAATGACCTGTTAAAGTTCTCTATAAAAGAAAGCATCAATCGAAGCCGAGGTA > 1:635039/1‑90AATGCAATCGTCATAACTGGTCAATAAATGAAATAAAAAATGACCTGTTAAAGTTCTCTATAAAAGAAAGCATCAATCGAAGCCGAGGTA > 2:695608/1‑90 ATAAATGAAATAAAAAATGACCTGTTAAAGTTCTCTATAAAAGAAAGCATCAATCGAAGCCGAGGTAGACTGGCCCCCTGAATCTCCAGA < 1:475862/90‑1 CCTGTTAAAGTTCTCTATAAAAGAAAGCATCAATCGAAGCCGAGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATA < 2:281892/90‑1 AAAGAAAGCATCAATCGAAGCCGAGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTA > 1:699165/1‑90 AAAGAAAGCATCAATCGAAGCCGAGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTA < 2:12805/90‑1 AAGCATCAATCGAAGCCGAGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTT > 2:674366/1‑90 AAGCATCAATCGAAGCCGAGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATA < 1:44898/73‑1 AAGCATCAATCGAAGCCGAGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATA > 2:44898/1‑73 AGCCGAGGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATT > 1:655009/1‑90 GTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAAC < 1:208231/90‑1 AGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAG < 1:470809/90‑1 AGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATA > 1:681823/1‑51 AGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATA < 2:681823/51‑1 AATGCAATCGTCATAACTGGTCAATAAATGAAATAAAAAATGACCTGTTAAAGTTCTCTATAAAAGAAAGCATCAATCGAAGCCGAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/290275‑290186‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAG > NZ_CP009273/376718‑376806 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |