Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1267301	1267311	11	3 [1]	[0] 2	[chaA]	[chaA]

CTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTA  >  NZ_CP009273/1267211‑1267307                                                                                          |        ctTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCAttt         <  1:493349/90‑1 (MQ=255) ctTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCAttt         <  1:637565/90‑1 (MQ=255)        ccaGGAACAGCTCTACCAGCGCCAGAACGGGGAAAATAAGAGAAGCCTCCTTGTGGCGGGTTTTTCCCGCCTCTTGAGCATTTGACATTa  <  1:328564/89‑1 (MQ=255)                                                                                          |        CTTCCCCACAGGAACAGCACTACCAGCGCCAGAACCGGGAAAATAAGCGAAGTCTCCTTGTGGCGGGTTTTTACCGCCTCTTGAGCATTTGACATTA  >  NZ_CP009273/1267211‑1267307

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑