Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1267301	1267311	11	3 [1]	[0] 2	[chaA]	[chaA]

TATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATA  >  NZ_CP009273/1267312‑1267351 |                                        tATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAAta  <  1:69782/40‑1 (MQ=255) tATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAAta  >  2:69782/1‑40 (MQ=255) |                                        TATCCCTTTGCAGATGAATTTATCGAAAATGTAAAAAATA  >  NZ_CP009273/1267312‑1267351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑