Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1066750	1066815	66	2 [1]	[1] 2	rutD	pyrimidine utilization protein D

CACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAG  >  NZ_CP009273/1066799‑1066905                  |                                                                                          cACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGtt                   <  2:242086/90‑1 (MQ=255)                  cgccgcTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAg  >  2:284451/1‑90 (MQ=255)                  |                                                                                          CACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAG  >  NZ_CP009273/1066799‑1066905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑