| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 287110 | NA (NA) | 27 (1.080) | 19/164 | 0.2 | 54.6% | intergenic (‑53/‑101) | BW25113_RS01405/BW25113_RS01410 | IS1‑like element IS1B family transposase/hypothetical protein |
| ? | NZ_CP009273 | 1902783 = | 23 (0.900) | coding (23/288 nt) | yebO | YebO family protein | |||||
TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCAcc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/287022‑287110‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGGCGCTATTCTACCACTGCTGGAGAGGAAGA > NZ_CP009273/1902783‑1902855 TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCAC > 2:218196/1‑90 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:339161/90‑1 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC > 2:474579/1‑90 AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCT < 2:311196/90‑1 ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTG > 2:578460/1‑90 GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACA > 2:597574/1‑90 GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACA > 1:430717/1‑90 CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAAC > 1:278209/1‑90 AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACT > 1:353139/1‑90 TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTC < 2:137516/90‑1 GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACC < 2:674944/90‑1 GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACC < 1:57125/90‑1 GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACC < 2:26541/90‑1 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACATGAATTTACAACTTCGTTCATTTCACCAC > 2:436490/1‑90 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAG > 2:91394/1‑90 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGG > 2:257650/1‑90 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGG > 1:509815/1‑90 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGGCG < 2:724258/90‑1 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGGCGCT < 2:143508/90‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGGCGCTATTCTACC < 2:343870/90‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGGCGCTATTCTACC < 2:509815/90‑1 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGGCGCTATTCTACCA > 2:421551/1‑90 CTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTC < 2:124506/59‑1 CTAAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTC > 1:124506/1‑59 AAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGGCGCTATTCTACCACTGCTGGAGA < 2:97071/90‑1 AAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGGCGCTATTCTACC > 1:689645/1‑79 AAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGGCGCTATTCTACC < 2:689645/79‑1 AAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGA > 1:467782/1‑65 AAATCAGTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGA < 2:467782/65‑1 GTAAGTTGGCAGCATCACCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGGCGCTATTCTACCACTGCTGGAGAGGAAGA > 2:699806/1‑90 CCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGGCGC < 2:60840/47‑1 CCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGGCGC > 1:60840/1‑47 TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCAcc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/287022‑287110‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTGAATTTACAACTTCGTTCATTTCACCACCTCTGAGTAGAGGCGCTATTCTACCACTGCTGGAGAGGAAGA > NZ_CP009273/1902783‑1902855 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |