| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP009273 | 22,835 | (TGCTGGGCG)1→2 | coding (445/2817 nt) | ileS → | isoleucine‑‑tRNA ligase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 22820 = | 4 (0.130) | 27 (0.990) | 21/152 | 0.2 | 93.7% | coding (430/2817 nt) | ileS | isoleucine‑‑tRNA ligase |
| ? | NZ_CP009273 | = 22828 | 0 (0.000) | coding (438/2817 nt) | ileS | isoleucine‑‑tRNA ligase | |||||
CCCAGCGCGCGGATGATGTTGGCTTCAGTTTTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/22899‑22820‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccagCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGCACTTGGCGCGGAACTCGG < NZ_CP009273/22828‑22749 CCCAGCGCGCGGATGATGTTGGCTTCAGTTTTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGA < 2:19875/90‑1 CCAGCGCGCGGATGATGTTGGCTTCAGTTTTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGAC < 2:736088/90‑1 CCAGCGCGCGGATGATGTTGGCTTCAGTTTTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGAC < 2:700328/90‑1 AGCGCGCGGATGATGTTGGCTTCAGTTTTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGG > 1:838849/1‑90 GCGCGCGGATGATGTTGGCTTCAGTTTTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGA > 2:377638/1‑90 GCGGATGATGTTGGCTTCAGTTTTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAA < 1:333250/90‑1 GCGGATGATGTTGGCTTCAGTTTTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAA < 2:225909/90‑1 TTGGCTTCAGTTTTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGT < 2:543113/90‑1 TTGGCTTCAGTTTTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGT < 2:25166/90‑1 GCTTCAGTTTTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGg < 1:75837/90‑2 GCTTCAGTTTTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGA > 2:549954/1‑90 AGTTTTGAAGTCCATGGTCAGGTACGGGTACGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTC < 2:189925/90‑1 TTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACC > 2:105931/1‑90 TCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTC < 1:177188/90‑1 CAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTA < 1:122181/90‑1 GGTGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGC > 1:374325/1‑90 TGCGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGCAC > 2:347216/1‑90 CGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGCACTT < 1:219115/90‑1 CGACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGCACTT > 1:143589/1‑90 GACCAGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGCACTTG > 2:142134/1‑90 AGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGCACTTGGCGC > 2:40754/1‑90 AGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGCACTTGGCGC < 2:501505/90‑1 AGTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGCACTTGGCGC < 1:192221/90‑1 GTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGCACTTGGCGCG > 1:331565/1‑90 GTCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGCACTTGGCGCG > 2:252314/1‑90 TCGCCCAGCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGCACTTGGCGCGG < 1:130369/90‑1 GCACGCCCAGCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGCACTTGGCGCGGAACTCGG > 2:750295/1‑90 CCCAGCGCGCGGATGATGTTGGCTTCAGTTTTGAAGTCCATGGTCAGGTACGGGTGCGACCAGTCGCCCAGCACGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/22899‑22820‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccagCACGCCCAGACGGATAAAGTCTTTGCGTTGACCGTCAACCTGGGTCGCCGCGTATTCGCGGCACTTGGCGCGGAACTCGG < NZ_CP009273/22828‑22749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |