Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2103016	2103049	34	2 [1]	[1] 2	wzx	O16 family O‑antigen flippase

AAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCC  >  NZ_CP009273/2102926‑2103021                                                                                          |       aaaCCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACg        <  1:45808/90‑1 (MQ=255)       aaTATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGcc  <  1:129029/90‑1 (MQ=255)                                                                                          |       AAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTGCTACCTTGAACGACAGCC  >  NZ_CP009273/2102926‑2103021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑