Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2005838	2005861	24	2 [1]	[0] 2	BW25113_RS10120/fliE	DUF5503 domain‑containing protein/flagellar hook‑basal body complex protein FliE

CCAGGGCGCATTCTAAAACACAATAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAG  >  NZ_CP009273/2005862‑2005951 |                                                                                          ccAGGGCGCATTCTAAAACACAATAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAg  >  1:294632/1‑90 (MQ=255) ccAGGGCGCATTCTAAAACACAATAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAg  >  1:6136/1‑90 (MQ=255) |                                                                                          CCAGGGCGCATTCTAAAACACAATAAAATTACCACTATCAAAAATCGCTCATATCCATCGCCCGGAATATGAATAAAAACATCAACAAAG  >  NZ_CP009273/2005862‑2005951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑