Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	993098	993107	10	4 [0]	[0] 2	ssuE/elfA	NADPH‑dependent FMN reductase/fimbrial protein

ATTCGGTCAGTCTGTCGGAGAGACAAGAAAATTCCAAATATAAATTTTGTGTATCTTTTTCTGAAAATAAACTAAAGAAAG  >  NZ_CP009273/993017‑993097                                                                                 | aTTCGGTCAGTCTGTCGGAGAGACAAGAAAATTCCAAATATAAATTTTGTGTATCTTTTTCTGAAAATAAACTaaagaaag  >  1:879696/1‑81 (MQ=255) aTTCGGTCAGTCTGTCGGAGAGACAAGAAAATTCCAAATATAAATTTTGTGTATCTTTTTCTGAAAATAAACTaaagaaag  <  2:879696/81‑1 (MQ=255)                                     aaTATAAATTTTGTGTATCTTTTTCTGAAAATAAACTaaagaaag  <  1:1004180/45‑1 (MQ=255)                                     aaTATAAATTTTGTGTATCTTTTTCTGAAAATAAACTaaagaaag  >  2:1004180/1‑45 (MQ=255)                                                                                 | ATTCGGTCAGTCTGTCGGAGAGACAAGAAAATTCCAAATATAAATTTTGTGTATCTTTTTCTGAAAATAAACTAAAGAAAG  >  NZ_CP009273/993017‑993097

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑