New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	= 283583	7 (0.230)	3 (0.110)	3/154	2.3	20.4%	coding (1084/1611 nt)	yagH	glycoside hydrolase family 43 protein
	?	NZ_CP009273	= 283644	17 (0.620)					coding (1145/1611 nt)	yagH	glycoside hydrolase family 43 protein

GGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP009273/283491‑283583 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccACGGTCGATTGGGTGAAGGTCGAATTGAGCGAGTCGTTGCCATAGAGCCGTAAGAAGCCCGGGCGCGCGGTGAGCGAGCCGAGGG  <  NZ_CP009273/283644‑283560                                                                                                                                                                                    GGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCGC                                                                                          <  1:113429/90‑1 GGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCGCGGCTCGCTCACCGCGC                                                                                          <  2:223092/90‑1                                         GCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCGCGCCACGGTCGATTGGGGGAAGGTCGAATTGAGCGAGTCGT                                                  >  1:81927/1‑90                                                                 CGACACCCTCGGCTCGCTCACCGCGCGCCACGGTCGATTGGGTGAAGGTCGAATTGAGCGAGTCGTTGCCATAGAGCCGTAAGAAGCCCG                          >  1:781877/1‑90                                                                                GCTCACCGCGCGCCACGGTCGATTGGGGGAAGGCCGAATTGAGCGGGGCGTTGCCATAGAGCCGTAAGAAGCCCGGGCGCGCGGGGAGCG           >  2:8059/1‑90                                                                                       GCGCGCCACGGTCGATTGGGTGAAGGTCGAATTGAGCGAGTCGTTGCCATAGAGCCGTAAGAAGCCCGGGCGCGCGGTGAGCGAGCCGAG    <  1:718761/90‑1                                                                                         GCGCCACGGTCGATTGGGTGAAGGTCGAATTGAGCGAGTCGTTGCCATAGAGCCGTAAGAAGCCCGGGCGCGCGGTGAGCGAGCCGAGGG  >  2:281860/1‑90                                                                                                                                                                                    GGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP009273/283491‑283583 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccACGGTCGATTGGGTGAAGGTCGAATTGAGCGAGTCGTTGCCATAGAGCCGTAAGAAGCCCGGGCGCGCGGTGAGCGAGCCGAGGG  <  NZ_CP009273/283644‑283560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.