New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NZ_CP009273 | 619757 = | 12 (0.550) | 3 (0.150) | 3/152 | 1.6 | 21.6% | coding (210/957 nt) | fepB | Fe2+‑enterobactin ABC transporter substrate‑binding protein |
? | NZ_CP009273 | 619788 = | 11 (0.560) | coding (179/957 nt) | fepB | Fe2+‑enterobactin ABC transporter substrate‑binding protein |
TTGTTTCCACCAGCGTCACCCTGACCGGCTCACTGCTGGCGATTGATGCTCCGGTGATCGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/619821‑619757 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgccagcAGTGAGCCGGTCAGGGTGACGCTGGTGGAAACAATACGCTGCGGCT > NZ_CP009273/619788‑619833 TTGTTTCCACCAGCGTCACCCTGACCGGCTCACTGCTGGCGATTGATGCTCCGGTGATCGCCAGCAGTGAGCCGGTCAGGGTGACGCTGG > 1:164740/1‑90 CACCAGCGTCACCCTGACCGGCTCACTGCTGGCGATTGATGCTCCGGTGATCGCCAGCAGTGAGCCGGTCAGGGTGACGCTGGTGGAAAC < 2:59490/90‑1 CACCAGCGTCACCCTGACCGGCTCACTGCTGGCGATTGATGCTCCGGTGA < 1:162031/50‑1 CACCAGCGTCACCCTGACCGGCTCACTGCTGGCGATTGATGCTCCGGTGA > 2:162031/1‑50 cGACCGGCTCACTGCTGGCGATTGATGCTCCGGTGATCGCCAGCAGTGAGCCGGTCAGGGTGACGCTGGTGGAAACAATACGCTGCGGCT < 1:596958/89‑1 TTGTTTCCACCAGCGTCACCCTGACCGGCTCACTGCTGGCGATTGATGCTCCGGTGATCGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/619821‑619757 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgccagcAGTGAGCCGGTCAGGGTGACGCTGGTGGAAACAATACGCTGCGGCT > NZ_CP009273/619788‑619833 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |