| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 619757 = | 12 (0.550) | 3 (0.150) | 3/152 | 1.6 | 21.6% | coding (210/957 nt) | fepB | Fe2+‑enterobactin ABC transporter substrate‑binding protein |
| ? | NZ_CP009273 | 619788 = | 11 (0.560) | coding (179/957 nt) | fepB | Fe2+‑enterobactin ABC transporter substrate‑binding protein | |||||
GTTGCAGTTTGCGTTCTTTCGCCACCTTGCTCCACTGGCGTAAAAAGCCCTGGTCATCCGCGACGCGGTTATTCGGCGTGGTCGCGCCGCTGGCGATCACCGGAGCATCAATCGCCAGCAGTGAGCCGGTCAGGGTGACGCTGGTGGAAACAATACGCTGCGG > NZ_CP009273/619669‑619831 | gTTGCAGTTTGCGTTCTTTCGCCACCTTGCTCCACTGGCGTAAAAAGCCCTGGTCATCCGCGACGCGGTTATTCGGCGTGGTCGcgccgc > 1:574828/1‑90 (MQ=255)gTTGCAGTTTGCGTTCTTTCGCCACCTTGCTCCACTGGCGTAAAAAGCCCTGGTCATCCGCGACGCGGTTATTCGGCGTGGTCGcgccgc > 2:161692/1‑90 (MQ=255)gTTGCAGTTTGCGTTCTTTCGCCACCTTGCTCCACTGGCGTAAAAAGCCCTGGTCATCCGCGACGCGGTTATTCGGCGTGGTCGcgccgc > 2:334012/1‑90 (MQ=255)gTTGCAGTTTGCGTTCTTTCGCCACCTTGCTCCACTGGCGTAAAAAGCCCTGGTCATCCGCGACGCGGTTATTCGGCGTGGTCGcgccgc > 2:404954/1‑90 (MQ=255) cGTGCTTTCGCCACCTTGCTCCACTGGCGTAAAAAGCCCTGGTCATCCGCGACGCGGTTATTCGGCGTGGTCGCGCCGCTGGCGATCAcc < 1:236858/90‑1 (MQ=255) cGCCACCTTGCTCCACTGGCGTAAAAAGCCCTGGTCATCCGCGACGCGGTTATTCGGCGTGGTCGCGCCGCTGGCGATCACCGGAGCATc < 1:378371/90‑1 (MQ=255) aaaaaGCCCTGGTCATCCGCGACGCGGTTATTCGGCGTGGTCGCGCCGCTGGCGATCACCGGAGCATCAATCGCCAGCAGTGAGCCGGTc < 1:404954/90‑1 (MQ=255) agccgcagcgtattgtttccaccagcgtcaccctgaccggctcactGCTGGCGATCACCGGAGCATCAATCGCCAGCAGTGAGCCGGtcg < 1:596958‑M1/44‑2 (MQ=255) gCCCTGGTCATCCGCGACGCGGTTATTCGGCGTGGTCGCGCCGCTGGCGATCACCGGAGCATCAATCGCCAGCAGTGAGCCGGTCAGGGt > 1:612563/1‑90 (MQ=255) cATCCGCGACGCGGTTATTCGGCGTGGTCGCGCCGCTGGCGATCACCGGAGCATCAATCGCCAGCAGTGAGCCGGTCAGGGTGACGCtgg < 2:161643/90‑1 (MQ=255) tCCGCGCCGCGGTTATTCGGCGTGGTGGCGCCGCTGGCGATCCCCGGAGCATCAATCGCCAGCAGTGAGCCGGTCAGGGTGACGCtggtg < 1:39266/90‑1 (MQ=255) gtttccaccagcgtcaccctgaccggctcactGCTGGCGATCACCGGAGCATCAATCGCCAGCAGTGAGCCGGTCAGGGTGACGCtggtg < 2:59490‑M1/58‑1 (MQ=255) ccagcgtcaccctgaccggctcactGCTGGCGATCACCGGAGCATCAATCGCCAGCAGTGAGCCGGTCAGGGTGACGCTGGTGGAAACaa > 1:164740‑M1/26‑90 (MQ=255) ggTTATTCGGCGTGGTCGCGCCGCTGGCGATCACCGGAGCATCAATCGCCAGCAGTGAGCCGGGCAGGGTGACGCTGGGGGAAACAATAc > 1:182644/1‑90 (MQ=255) cGGCGTGGTCGCGCCGCTGGCGATCACCGGAGCATCAATCGCCAGCAGTGAGCCGGTCAGGGTGACGCTGGTGGAAACAATACGCTGCgg < 1:598327/90‑1 (MQ=255) | GTTGCAGTTTGCGTTCTTTCGCCACCTTGCTCCACTGGCGTAAAAAGCCCTGGTCATCCGCGACGCGGTTATTCGGCGTGGTCGCGCCGCTGGCGATCACCGGAGCATCAATCGCCAGCAGTGAGCCGGTCAGGGTGACGCTGGTGGAAACAATACGCTGCGG > NZ_CP009273/619669‑619831 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |