| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 295395 = | 12 (0.550) | 4 (0.210) | 4/150 | 1.3 | 28.0% | coding (1251/2199 nt) | paoC | aldehyde oxidoreductase molybdenum‑binding subunit PaoC |
| ? | NZ_CP009273 | 295468 = | 10 (0.520) | coding (1178/2199 nt) | paoC | aldehyde oxidoreductase molybdenum‑binding subunit PaoC | |||||
GCGAAAGCCCGCCGCAACACCGTGGCCGACTAGCCACTCCCCGTCGCGCACCTGTCCGGGTGTGGCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGTC > NZ_CP009273/295326‑295484 | gCGAAAGCCCGCCGCAACACCGTGGCCGACTAGCCACTCCCCGTCGCGCACCTGTCCGGGTGTGGCGTTGCGCTGCTTCCAGCCAAAttt > 2:145758/1‑90 (MQ=255) acacCGTGGCCGACTAGCCACTCCCCGTCGCGCACCTGTCCGGGTGTGGCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTgcgc < 1:65060/90‑1 (MQ=255) gtcgagtttcgcatcctgaatgacactcaggttgaccccgccgacccgacGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAg < 2:155838‑M1/40‑1 (MQ=255) ccGTGGCCGACTAGCCACTCCCCGTCGCGCACCTGTCCGGGTGTGGCGTTgcgc < 2:575749/54‑1 (MQ=255) ccGTGGCCGACTAGCCACTCCCCGTCGCGCACCTGTCCGGGTGTGGCGTTgcgc > 1:575749/1‑54 (MQ=255) gTGGCCGACTAGCCACTCCCCGTCGCGCACCTGTCCGGGTGTGGCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCa < 1:145758/90‑1 (MQ=255) cgagtttcgcatcctgaatgacactcaggttgcccccgccgacccgacGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCa > 1:155838‑M1/49‑90 (MQ=255) cTCCCCGTCGCGCACCTGTCCGGGTGTGGCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACg > 1:587388/1‑90 (MQ=255) actcaggttgaccccgccgacccgacGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCgagag < 1:3814‑M1/64‑1 (MQ=255) tGTCCGGGTGTGGCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACt > 1:569233/1‑61 (MQ=255) tGTCCGGGTGTGGCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACt < 2:569233/61‑1 (MQ=255) tGTCCGGGTGTGGCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAgcgc > 1:207609/1‑90 (MQ=255) ccccgccgacccgacGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCgt < 1:324784‑M1/75‑1 (MQ=255) ggTGTGGCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCgtcggg > 1:10840/1‑90 (MQ=255) ggCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTcggc > 1:294687/1‑90 (MQ=255) ggCGTTGCGCTGCTGCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCACCGCGTCGGGTcggc < 1:187367/90‑1 (MQ=255) GCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGTc > 1:369440‑M1/1‑90 (MQ=255) GCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGTc > 2:386521‑M1/1‑90 (MQ=255) | GCGAAAGCCCGCCGCAACACCGTGGCCGACTAGCCACTCCCCGTCGCGCACCTGTCCGGGTGTGGCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGTC > NZ_CP009273/295326‑295484 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |