| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 295395 = | 12 (0.550) | 4 (0.210) | 4/150 | 1.3 | 28.0% | coding (1251/2199 nt) | paoC | aldehyde oxidoreductase molybdenum‑binding subunit PaoC |
| ? | NZ_CP009273 | 295468 = | 10 (0.520) | coding (1178/2199 nt) | paoC | aldehyde oxidoreductase molybdenum‑binding subunit PaoC | |||||
TCCGGGTGTGGCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGTCAACCTGAGTGTCATTCAGGATGCGAAACTCGACGGGATCGATGCCCGCTTTTTCCGCCAGT > NZ_CP009273/295380‑295545 | ccccgccgacccgacGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCgt < 1:324784‑M1/75‑1 (MQ=255) ggTGTGGCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCgtcggg > 1:10840/1‑90 (MQ=255) ggCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTcggc > 1:294687/1‑90 (MQ=255) ggCGTTGCGCTGCTGCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCACCGCGTCGGGTcggc < 1:187367/90‑1 (MQ=255) acgcgctgcttctctcgccgtcagcttatcgagtgcttgcgcaccggagcggataaatttggctggaagcagcgcGTCGGGTCGGCgggg < 1:324784‑M2/15‑1 (MQ=255) GCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGTc > 2:386521‑M1/1‑90 (MQ=255) GCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGTc > 1:369440‑M1/1‑90 (MQ=255) GCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGGCAACCt < 2:586735‑M1/90‑1 (MQ=255) ctctcgccgtcagcttatcgagtgcttgcgcaccggagcggataaatttggctggaagcagcgcGTCGGGTCGGCGGGGTCAACCTGAgt < 1:3814‑M2/26‑1 (MQ=255) aaTTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGTCAACCTGAGTGTCATTc < 2:294687/90‑1 (MQ=255) aaTTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGTCAACCTGAGTGTCATTc < 2:476474/90‑1 (MQ=255) tCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGTCAACCTGAGTGTCATTCAGGATg > 1:126643/1‑90 (MQ=255) tgcttgcgcaccggagcggataaatttggctggaagcagcgcGTCGGGTCGGCGGGGGCAACCTGAGTGTCATTCAGGATGCGAAACTCg > 1:155838‑M2/43‑90 (MQ=255) cttgcgcaccggagcggataaatttggctggaagcagcgcGTCGGGTCGGCGGGGTCAACCTGAGTGTCATTCAGGATGCGAAACTCGAc < 2:155838‑M2/50‑1 (MQ=255) aCTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGTCAACCTGAGTGTCATTCAGGATGCGAAACTCGACGGGATCGa > 2:499508/1‑90 (MQ=255) gccGGCGCGAGAAGCAGCGCGGCGGGTCGGCGGGGTCAACCTGAGTGTCATTCAGGATGCGAAACTCGACGGGATCGATGCCCGCttttt < 1:14717/88‑1 (MQ=255) aCGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGGCAACCTGAGGGTCATTCAGGATGCGAAACTCGACGGGATCGATGCCCGCTTTTTc > 1:411606/1‑90 (MQ=255) gagaAGCAGCGCGTCGGGTCGGCGGGGTCAACCTGAGTGTCATTCAGGATGCGAAACTCGACGGGATCGATGCCCGCTTTTTCCGCCAGt < 2:290079/90‑1 (MQ=255) | TCCGGGTGTGGCGTTGCGCTGCTTCCAGCCAAATTTATCCGCTCCGGTGCGCAAGCACTCGATAAGCTGACGGCGAGAGAAGCAGCGCGTCGGGTCGGCGGGGTCAACCTGAGTGTCATTCAGGATGCGAAACTCGACGGGATCGATGCCCGCTTTTTCCGCCAGT > NZ_CP009273/295380‑295545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |