| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP009273 | 3,631,312 | (ATGTTGCTGGCGGC)1→2 | coding (311/1500 nt) | pitA → | inorganic phosphate transporter PitA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 3631299 = | 4 (0.130) | 50 (1.660) | 26/168 | 0.1 | 90.9% | coding (298/1500 nt) | pitA | inorganic phosphate transporter PitA |
| ? | NZ_CP009273 | = 3631312 | 6 (0.200) | coding (311/1500 nt) | pitA | inorganic phosphate transporter PitA | |||||
TGATCGCGCCAATCAGCGTATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/3631386‑3631299‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCCCATATTAAGCAGCAGATCCGTCGGCAGCATATGC < NZ_CP009273/3631312‑3631232 TGATCGCGCCAATCAGCGTATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGC < 2:282207/90‑1 ATCGCGCCAATCAGCGTATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCG < 1:804737/90‑1 ATCGCGCCAATCAGCGTATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCG < 2:508129/90‑1 CGCGCCAATCAGCGTATGAGAGCTGGATGCAGGTAAACCAAAGTCCCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCC < 1:728022/90‑1 CGCGCCAATCAGCGTATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCC < 2:348240/90‑1 CGCGCCAATCAGCGTATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCC < 2:495308/90‑1 cctAATCATCGTATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGC < 1:790275/87‑1 GCCAATCAGCGTATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGC < 1:679879/90‑1 GCCAAACAGCGTATGAGAGCTGGATGCAGGTAAACCAAAGTGCCAGGTAACCAGGTTCCAGATAATCGCCGCCAGCAGCATGCCGCCAGC < 1:568416/90‑1 CAATCAGCGTATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAA < 2:154844/90‑1 GTATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGA < 1:802448/90‑1 GTATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGA < 2:607297/90‑1 TATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAA < 2:212349/90‑1 TATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAA < 1:678051/90‑1 AGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACC < 2:38913/90‑1 GCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATG > 1:429659/1‑90 GCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATG > 2:404696/1‑90 GCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATG > 2:419403/1‑90 GCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATG > 2:683636/1‑90 GCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGC < 1:712097/72‑1 GCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGC > 2:712097/1‑72 GCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAG < 2:153207/71‑1 GCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAG > 1:153207/1‑71 GGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCA > 2:441982/1‑90 GGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCA > 2:169360/1‑90 GGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGC < 1:231117/69‑1 GGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGC > 2:231117/1‑69 GATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAA < 1:404696/90‑1 ACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGAC < 1:199911/90‑1 ACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGAC < 2:725738/90‑1 CCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACG < 2:429659/90‑1 AGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCC > 2:212580/1‑90 AGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCCCATATT > 1:112046/1‑90 AGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGAC > 1:670242/1‑79 AGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGAC < 2:670242/79‑1 CCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCCCATATTAAGCA > 1:313966/1‑90 CCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAG > 2:135162/1‑40 CCCAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAG < 1:135162/40‑1 CAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAA > 2:23281/1‑61 CAGGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAA < 1:23281/61‑1 GGTTCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCCCATATTAAGCAGCAG < 2:112046/90‑1 TCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCCCATATTAA < 2:266406/80‑1 TCCAGATAATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCCCATATTAA > 1:266406/1‑80 AATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCCCATATTAAGCAGCAGATCCGTCGGC > 2:355844/1‑90 ATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCCCATATTAAGCAGCAGATCCGTCGGCA < 1:97061/90‑1 ATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCCCATATTAAGCAGCAGATCCGTCGGCA < 1:581458/90‑1 ATCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCCCATATTAAGCAGCAGATCCGTCGGCA < 1:169360/90‑1 TCGCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCCCATATTAAGCAGCAGATCCGTCGGCAG < 1:857878/90‑1 GCCGCCAGCAACATGCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCCCATATTAAGCAGCAGATCCGTCGGCAGCA > 2:584315/1‑90 CAGCAACATGCCGCCAGCAACATAGAGAACCCCATGGCAAGGCCATGAGACGATCCCATATTAAGCAGCAGATCCGTCGGCAGCATATGC < 1:591274/90‑1 TGATCGCGCCAATCAGCGTATGAGAGCTGGATGCAGGTAAACCAAAGTACCAGGTACCCAGGTTCCAGATAATCGCCGCCAGCAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/3631386‑3631299‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGCCAGCAACATAGAGAACACCATGGCAAGGCCATGAGACGATCCCATATTAAGCAGCAGATCCGTCGGCAGCATATGC < NZ_CP009273/3631312‑3631232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |