New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	4623274 =	26 (0.860)	4 (0.150)	4/150	1.7	14.5%	coding (289/513 nt)	yjjX	inosine/xanthosine triphosphatase
	?	NZ_CP009273	4623410 =	24 (0.890)					coding (153/513 nt)	yjjX	inosine/xanthosine triphosphatase
Rejected: Frequency below/above cutoff threshold.

CAGAGGCTGATTTTTGGGTGGCGATTGAAGCTGGCATCGATGGTGACAGCACTTTCAGTTGGGTGGTGATTGAAAACGCCAGCCAGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP009273/4623363‑4623274 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcgcgCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTCGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATC  >  NZ_CP009273/4623410‑4623494                                                                                                                                                                                 CAGAGGCTGATTTTTGGGTGGCGATTGAAGCTGGCATCGATGGTGACAGCACTTTCAGTTGGGTGGTGATTGAAAACGCCAGCCAGCGCG                                                                                       >  1:399902/1‑90                        ATTGAAGCTGGCATCGATGGTGACAGCACTTTCAGTTGGGTGGTGATTGAAAACGCCAGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCT                                                                <  2:611528/90‑1                          TGAAGCTGGCATCGATGGTGACAGCACTTTCAGTTGGGTGGTGATTGAAAACGCCAGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGT                                                              <  1:434541/90‑1                                    ATCGATGGTGACACCATTTCCAGTTGGGTGGTGATTGAAAACGCCAGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACAC                                                    <  1:92539/90‑1                                                   ACTTGCAGTTGGGTGGTGATTGAAAACGCCAGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTCGACGGCAA                                     <  1:52536/90‑1                                                                                  GCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTCGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAA      >  1:289703/1‑90                                                                                    CAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTCGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGA    <  2:448302/90‑1                                                                                      GCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTCGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATC  <  1:611528/90‑1                                                                                                                                                                                 CAGAGGCTGATTTTTGGGTGGCGATTGAAGCTGGCATCGATGGTGACAGCACTTTCAGTTGGGTGGTGATTGAAAACGCCAGCCAGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP009273/4623363‑4623274 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcgcgCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTCGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATC  >  NZ_CP009273/4623410‑4623494

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.