| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 4623274 = | 26 (0.860) | 4 (0.150) | 4/150 | 1.7 | 14.5% | coding (289/513 nt) | yjjX | inosine/xanthosine triphosphatase |
| ? | NZ_CP009273 | 4623410 = | 24 (0.890) | coding (153/513 nt) | yjjX | inosine/xanthosine triphosphatase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTG > NZ_CP009273/4623185‑4623363 | aCGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCGAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTcgcc > 2:551722/1‑90 (MQ=255) gatcttcggcgaaggatcctgccatattgcatccgttgccgtcgagagcggtgtaccggaacagccctttggcagtgaggaaacgcgcgc < 1:611528‑M1/5‑1 (MQ=255) gACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCgcgc > 1:587119/1‑90 (MQ=255) aCATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCgct > 2:162927/1‑90 (MQ=255) aCATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCgct > 1:512467/1‑90 (MQ=255) tcttcggcgaaggatcctgccatattgcatccgttgccgtcgagagcggtgtaccggaacagccctttggcagtgaggaaacgCGCgctg < 2:448302‑M1/7‑1 (MQ=255) ttcggcgaaggatcctgccatattgcatccgttgccgtcgagagcggtgtaccggaacagccctttggcagtgaggaaacgCGCgctggc > 1:289703‑M1/82‑90 (MQ=255) tCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCgctggc < 1:786639/90‑1 (MQ=255) aCCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGtt > 2:628359/1‑90 (MQ=255) aaGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTc > 2:705672/1‑90 (MQ=255) aaGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTc > 2:652078/1‑90 (MQ=255) ccTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGt < 1:670430/81‑1 (MQ=255) ccTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGt > 2:670430/1‑81 (MQ=255) tCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATcacc > 2:444292/1‑90 (MQ=255) cACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATcacca > 2:339775/1‑90 (MQ=255) aCCTTCACGCACTTTTCCCAGAATCACCGCAGGCACCGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATcaccac < 2:502670/90‑1 (MQ=255) cTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCAccc < 1:368468/90‑1 (MQ=255) ttCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCa < 2:336775/90‑1 (MQ=255) tCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCaa < 1:339134/90‑1 (MQ=255) cTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAg < 1:744516/90‑1 (MQ=255) cTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAg < 1:102836/90‑1 (MQ=255) ttgccgtcgagagcggtgtaccggaacagccctttggcagtgaggaaacgCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGCAAGt < 1:52536‑M1/40‑1 (MQ=255) ttttcAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGc > 1:231580/5‑90 (MQ=255) tttCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGc < 2:827038/90‑1 (MQ=255) cAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTc < 2:512467/90‑1 (MQ=255) cAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTc < 2:431995/90‑1 (MQ=255) gtgtaccggaacagccctttggcagtgaggaaacgCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGGAAATGGTGTCACCATCGAt < 1:92539‑M1/55‑1 (MQ=255) acagccctttggcagtgaggaaacgCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCa < 1:434541‑M1/65‑1 (MQ=255) agccctttggcagtgaggaaacgCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAAt < 2:611528‑M1/67‑1 (MQ=255) gcCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCa > 2:768792/1‑90 (MQ=255) tCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGcc < 2:598982/90‑1 (MQ=255) ccgcGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCctct < 2:612242/90‑1 (MQ=255) ccgcGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCctct < 1:140061/90‑1 (MQ=255) CGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTg > 1:399902‑M1/1‑90 (MQ=255) | ACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTG > NZ_CP009273/4623185‑4623363 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |