| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 3401657 | 78 (1.910) | 3 (0.070) | 3/166 | 2.8 | 3.6% | coding (692/1452 nt) | panF | sodium/pantothenate symporter |
| ? | NZ_CP009273 | = 3401664 | 82 (2.010) | coding (699/1452 nt) | panF | sodium/pantothenate symporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATGCCGCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTGCGCTGTATC > NZ_CP009273/3401579‑3401748 | aTGCCGCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTttgt < 1:126531‑M2/90‑5 (MQ=255)aTGCCGCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGt > 1:617853/1‑90 (MQ=255) tGCCGCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTc > 2:861494/1‑90 (MQ=255) tGCCGCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTc > 2:116328/1‑90 (MQ=255) tGCCGCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTc > 2:112265/1‑90 (MQ=255) cGCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTTTGTCgcc < 2:126531/90‑1 (MQ=255) gCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcct < 1:72210/90‑1 (MQ=255) gCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcct < 2:367527/90‑1 (MQ=255) gCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcct < 2:468489/90‑1 (MQ=255) gCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcct < 1:817291/90‑1 (MQ=255) cTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcctg < 1:911676/90‑1 (MQ=255) cTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcctg > 1:280198/1‑90 (MQ=255) ggcggcTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcctgcc < 1:90746/90‑1 (MQ=255) gcggcTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcctgcct > 1:361684/1‑90 (MQ=255) cTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTAt < 1:685133/90‑1 (MQ=255) cTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTAt < 2:263565/90‑1 (MQ=255) gTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGAcgt < 1:394934/90‑1 (MQ=255) gTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGAcgt < 1:114414/90‑1 (MQ=255) gTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGAcgt < 1:246544/90‑1 (MQ=255) gTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGAcgt < 1:167379/90‑1 (MQ=255) aGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTg < 1:252977/90‑1 (MQ=255) aGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTg < 1:474638/90‑1 (MQ=255) aGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTg < 2:985517/90‑1 (MQ=255) gTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTgg > 1:1212028/1‑90 (MQ=255) aCAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGt < 2:31288/90‑1 (MQ=255) aCAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGt > 2:260489/1‑90 (MQ=255) gACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACt > 2:320296/1‑90 (MQ=255) gACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACt < 2:1060434/90‑1 (MQ=255) gACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACt > 2:977009/1‑90 (MQ=255) gACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTAGGACGTCGTTCTGGGTACt > 1:723168/1‑90 (MQ=255) ccTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTgg > 2:885699/1‑90 (MQ=255) ttGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGgtg < 1:885699/90‑1 (MQ=255) ttGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGgtg < 2:371224/90‑1 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTtcagcgccttgtggcgtaa < 2:777507‑M2/69‑20 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTtcagcgccttgtggcgtaa > 1:777507‑M2/1‑50 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcct > 2:727463/1‑59 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcct < 1:727463/59‑1 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcc < 1:271062/58‑1 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcc > 2:271062/1‑58 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGAcgt > 1:1056255/1‑72 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGAcgt < 2:1056255/72‑1 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGgtgt > 2:449905/1‑90 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGgtgt > 1:279003/1‑90 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGgtgt > 1:296306/1‑90 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGgtgt > 2:430947/1‑90 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGgtgt > 2:1038679/1‑90 (MQ=255) tGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGgtgt > 1:154832/1‑90 (MQ=255) cATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcct > 1:726535/1‑52 (MQ=255) cATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCgcct < 2:726535/52‑1 (MQ=255) aTCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGc > 1:684115/1‑90 (MQ=255) gCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGAcgt < 1:657297/56‑1 (MQ=255) gCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGAcgt > 2:657297/1‑56 (MQ=255) aaCTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGcc < 2:986600/90‑1 (MQ=255) aaCTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGcc < 1:430947/90‑1 (MQ=255) aaCTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGcc < 2:553230/90‑1 (MQ=255) aaCTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGcc < 1:60275/90‑1 (MQ=255) ggTTACGCCACAAGGCGCTGACGATATTCTGTCgcctg < 2:1021981/38‑1 (MQ=255) ggTTACGCCACAAGGCGCTGACGATATTCTGTCgcctg > 1:1021981/1‑38 (MQ=255) ggTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTg < 2:795609/57‑1 (MQ=255) ggTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTg > 1:795609/1‑57 (MQ=255) ggTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGcc > 2:925505/1‑90 (MQ=255) ggTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGGGTGTTTTGGCGTGATTGGCCTGcc > 1:947770/1‑90 (MQ=255) gTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCg < 2:557322/90‑1 (MQ=255) aCGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCAt < 1:848777/90‑1 (MQ=255) cGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCg < 2:466802/86‑1 (MQ=255) cGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCg > 1:466802/1‑86 (MQ=255) caAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGAcgtcg < 2:890687/42‑1 (MQ=255) caAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGAcgtcg > 1:890687/1‑42 (MQ=255) aaGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCgg < 1:801493/90‑1 (MQ=255) aaGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCgg < 1:280522/90‑1 (MQ=255) aGGCGCTGACGATATTCTGTCGCCTGCCTTTATGAcgt < 1:1043272/38‑1 (MQ=255) aGGCGCTGACGATATTCTGTCGCCTGCCTTTATGAcgt > 2:1043272/1‑38 (MQ=255) ggCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTg < 2:193566/90‑1 (MQ=255) gcgcTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTgc < 2:859630/90‑1 (MQ=255) gcgcTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTgc < 1:925505/90‑1 (MQ=255) cgcTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTgcg < 1:116328/90‑1 (MQ=255) gcTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTgcgc < 2:280198/90‑1 (MQ=255) tGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTGCGCTg > 1:601890/1‑90 (MQ=255) aCGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTGCGCTGTa < 2:617853/90‑1 (MQ=255) gATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTGCGCTGTAtc < 2:282762/90‑1 (MQ=255) gATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTGCGCTGTAtc < 2:279003/90‑1 (MQ=255) gATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTGCGCTGTAtc < 2:103080/90‑1 (MQ=255) gATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTGCGCTGTAtc < 1:767575/90‑1 (MQ=255) tatTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTAc > 2:292473/1‑38 (MQ=255) tatTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTAc < 1:292473/38‑1 (MQ=255) | ATGCCGCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTGCGCTGTATC > NZ_CP009273/3401579‑3401748 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |