BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NZ_CP009273	2,399,465	Δ7 bp	coding (650‑656/939 nt)	lrhA ←	transcriptional regulator LrhA

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2399465	2399471	7	105 [0]	[0] 105	lrhA	transcriptional regulator LrhA

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	= 2399464	0 (0.000)	105 (1.380)	42/166	0.2	100%	coding (657/939 nt)	lrhA	transcriptional regulator LrhA
*	?	NZ_CP009273	2399472 =	0 (0.000)	105 (1.380)	42/166	0.2	100%	coding (649/939 nt)	lrhA	transcriptional regulator LrhA

Only 100 of 105 total aligned reads displayed.

CACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAA  >  NZ_CP009273/2399376‑2399550

cacGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGa                                                                                       >  2:1887413‑M1/1‑89 (MQ=255)

  cGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaag                                                                                     >  2:706715‑M1/1‑87 (MQ=255)

  cGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaag                                                                                     >  2:1756586‑M1/1‑87 (MQ=255)

     aGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagcca                                                                                  >  2:1682952‑M1/1‑84 (MQ=255)

     aGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagcca                                                                                  >  2:2040633‑M1/1‑84 (MQ=255)

       gTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagt                                                                                >  2:387135‑M1/1‑82 (MQ=255)

         ccGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcg                                                                              >  1:1069073‑M1/1‑80 (MQ=255)

           gggCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgcc                                                                            <  1:2129698‑M1/90‑13 (MQ=255)

           gggCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgcc                                                                            >  1:2171910‑M1/1‑78 (MQ=255)

           gggCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgcc                                                                            <  2:2182743‑M1/90‑13 (MQ=255)

           gggCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgcc                                                                            <  1:301961‑M1/90‑13 (MQ=255)

           gggCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgcc                                                                            <  2:2171910‑M1/90‑13 (MQ=255)

           gggCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgcc                                                                            <  2:1172151‑M1/90‑13 (MQ=255)

             gCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccat                                                                          <  1:1139243‑M1/90‑15 (MQ=255)

              cTCATCATCTCACCCGGCCTTGCCGCCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatg                                                                         <  2:1007219‑M1/90‑16 (MQ=255)

                catcatCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatgga                                                                       >  1:1534759‑M1/1‑73 (MQ=255)

                catcatCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatgga                                                                       >  2:1495607‑M1/1‑73 (MQ=255)

                catcatCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGa                                                                                       <  1:331900‑M1/74‑2 (MQ=255)

                catcatCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGa                                                                                       >  2:331900‑M1/1‑73 (MQ=255)

                     tctcAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatc                                                                  >  1:151680‑M1/1‑68 (MQ=255)

                     tctcAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatc                                                                  <  2:1831663‑M1/90‑23 (MQ=255)

                     tctcAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatc                                                                  <  1:146257‑M1/90‑23 (MQ=255)

                     tctcAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatc                                                                  <  2:212444‑M1/90‑23 (MQ=255)

                      ctcAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatct                                                                 >  2:1658150‑M1/1‑67 (MQ=255)

                          aCCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctt                                                             <  1:1658150‑M1/90‑28 (MQ=255)

                          aCCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctt                                                             >  2:439283‑M1/1‑63 (MQ=255)

                             ggCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttat                                                          >  2:223727‑M1/1‑60 (MQ=255)

                             ggCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttat                                                          >  1:1293409‑M1/1‑60 (MQ=255)

                             ggCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagccgccatggaatatctgctttat                                                          >  2:1235736‑M1/1‑60 (MQ=255)

                              gCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttatt                                                         >  2:530212‑M1/1‑59 (MQ=255)

                                   gCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcg                                                    <  2:553872‑M1/90‑37 (MQ=255)

                                   gCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcg                                                    <  1:2040633‑M1/90‑37 (MQ=255)

                                   gCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcg                                                    <  2:848523‑M1/90‑37 (MQ=255)

                                        cACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgcc                                               <  1:504407‑M1/90‑42 (MQ=255)

                                        cACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgcc                                               >  1:499367‑M1/1‑49 (MQ=255)

                                        cACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgcc                                               >  1:1956875‑M1/1‑49 (MQ=255)

                                        cACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgcc                                               <  2:1069073‑M1/90‑42 (MQ=255)

                                        cACGCCAAGACCGGCTTTCACTGCCGCACGAACAGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgcc                                               <  2:4033‑M1/90‑42 (MQ=255)

                                                    ggCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcg                                   >  1:1459361‑M1/1‑37 (MQ=255)

                                                    ggCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcg                                   >  1:927‑M1/1‑37 (MQ=255)

                                                    ggCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcg                                   >  2:553117‑M1/1‑37 (MQ=255)

                                                    ggCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcg                                   >  1:610488‑M1/1‑37 (MQ=255)

                                                    ggCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcg                                   >  2:1843894‑M1/1‑37 (MQ=255)

                                                    ggCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcg                                   >  2:2063132‑M1/1‑37 (MQ=255)

                                                    ggCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcg                                   >  1:374598‑M1/1‑37 (MQ=255)

                                                    ggCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcg                                   >  2:381804‑M1/1‑37 (MQ=255)

                                                    ggCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcg                                   >  2:881293‑M1/1‑37 (MQ=255)

                                                    ggCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcg                                   >  1:2129288‑M1/1‑37 (MQ=255)

                                                    ggCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcggcgccagcaccatatcg                                   >  1:1554717‑M1/1‑37 (MQ=255)

                                                     gCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcg                                                    >  2:1352642‑M1/1‑36 (MQ=255)

                                                     gCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcg                                                    <  1:1352642‑M1/72‑37 (MQ=255)

                                                         tCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaa                              <  1:995133‑M1/90‑59 (MQ=255)

                                                         tCACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaa                              <  2:374598‑M1/90‑59 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggtatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  1:531628‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcactatatcgcgaaac                             <  1:2080905‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  2:1793605‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  2:490727‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  2:2219871‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  2:927‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  2:253667‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  2:1472636‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  1:977655‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  1:881293‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  1:553117‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  1:530212‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  1:1843894‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  1:501976‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  1:2063132‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  1:281181‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  1:299510‑M1/90‑60 (MQ=255)

                                                          cACTGCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  1:447638‑M1/90‑60 (MQ=255)

                                                              gCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggc                         >  1:1009536‑M1/1‑27 (MQ=255)

                                                              gCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggc                         >  2:1555949‑M1/1‑27 (MQ=255)

                                                              gCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcacca                                        >  2:1104868‑M1/1‑27 (MQ=255)

                                                              gCCGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcacca                                        <  1:1104868‑M1/75‑49 (MQ=255)

                                                               ccGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggct                        <  2:610488‑M1/90‑65 (MQ=255)

                                                               ccGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggct                        <  1:1598126‑M1/90‑65 (MQ=255)

                                                               ccGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggct                        <  1:167295‑M1/90‑65 (MQ=255)

                                                               ccGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctt                                                             <  1:506428‑M1/53‑28 (MQ=255)

                                                               ccGCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctt                                                             >  2:506428‑M1/1‑26 (MQ=255)

                                                                 gCACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctag                      >  1:140960‑M1/1‑24 (MQ=255)

                                                                 gCACGAACGGCCGGAAGCGTCGAGaagccagtcgcca                                                                           <  2:1990019‑M1/37‑14 (MQ=255)

                                                                 gCACGAACGGCCGGAAGCGTCGAGaagccagtcgcca                                                                           >  1:1990019‑M1/1‑24 (MQ=255)

                                                                  cACGAACGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctagg                     <  1:1220144‑M1/90‑68 (MQ=255)

                                                                       aCGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctaggatcat                <  1:586332‑M1/90‑73 (MQ=255)

                                                                        cGGCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctaggatcatc               >  2:2018124‑M1/1‑17 (MQ=255)

                                                                         ggCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctaggatcatcc              <  1:381804‑M1/90‑75 (MQ=255)

                                                                         ggCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgcc                                               >  2:432029‑M1/1‑16 (MQ=255)

                                                                         ggCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgcc                                               <  1:432029‑M1/57‑42 (MQ=255)

                                                                          gCCGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctaggatcatcca             <  1:1495607‑M1/90‑76 (MQ=255)

                                                                            cGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctaggatcatccagc           <  1:1682952‑M1/90‑78 (MQ=255)

                                                                            cGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctaggatcatccagc           <  1:1696141‑M1/90‑78 (MQ=255)

                                                                            cGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctaggatcatccagc           <  2:354405‑M1/90‑78 (MQ=255)

                                                                            cGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctaggatcatccagc           <  1:1113905‑M1/90‑78 (MQ=255)

                                                                            cGGAAGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctaggatcatccagc           <  2:1551565‑M1/90‑78 (MQ=255)

                                                                               aaGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctaggatcatccagcaat        <  1:1949907‑M1/90‑81 (MQ=255)

                                                                               aaGCGTCGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctaggatcatccagcaat        <  1:2152506‑M1/90‑81 (MQ=255)

                                                                                     cGAGaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaacgggctaggatcatccagcaatacaaga  <  1:2140540‑M1/90‑87 (MQ=255)

                                                                                        gaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             <  2:458522‑M1/60‑60 (MQ=255)

                                                                                        gaagccagtcgccatggaatatctgctttattaagcgtcgccagcaccatatcgcgaaac                             >  1:458522‑M1/1‑1 (MQ=255)

CACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAA  >  NZ_CP009273/2399376‑2399550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`