BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NZ_CP009273	2,399,465	Δ7 bp	coding (650‑656/939 nt)	lrhA ←	transcriptional regulator LrhA

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2399465	2399471	7	105 [0]	[0] 105	lrhA	transcriptional regulator LrhA

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	= 2399464	0 (0.000)	105 (1.380)	42/166	0.2	100%	coding (657/939 nt)	lrhA	transcriptional regulator LrhA
*	?	NZ_CP009273	2399472 =	0 (0.000)	105 (1.380)	42/166	0.2	100%	coding (649/939 nt)	lrhA	transcriptional regulator LrhA

Only 100 of 105 total aligned reads displayed.

GTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGA  >  NZ_CP009273/2399383‑2399557

cacgcaggtccgggctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgaga                                                                                       >  2:1887413‑M2/90‑90 (MQ=255)

  cgcaggtccgggctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAg                                                                                     >  2:706715‑M2/88‑90 (MQ=255)

  cgcaggtccgggctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAg                                                                                     >  2:1756586‑M2/88‑90 (MQ=255)

     aggtccgggctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCa                                                                                  >  2:1682952‑M2/85‑90 (MQ=255)

     aggtccgggctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCa                                                                                  >  2:2040633‑M2/85‑90 (MQ=255)

       gtccgggctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGt                                                                                >  2:387135‑M2/83‑90 (MQ=255)

         ccgggctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCg                                                                              >  1:1069073‑M2/81‑90 (MQ=255)

           gggctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGcc                                                                            <  1:2129698‑M2/12‑1 (MQ=255)

           gggctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGcc                                                                            >  1:2171910‑M2/79‑90 (MQ=255)

           gggctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGcc                                                                            <  2:2182743‑M2/12‑1 (MQ=255)

           gggctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGcc                                                                            <  1:301961‑M2/12‑1 (MQ=255)

           gggctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGcc                                                                            <  2:2171910‑M2/12‑1 (MQ=255)

           gggctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGcc                                                                            <  2:1172151‑M2/12‑1 (MQ=255)

             gctcatcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCAt                                                                          <  1:1139243‑M2/14‑1 (MQ=255)

              ctcatcatctcacccggccttgccgccacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATg                                                                         <  2:1007219‑M2/15‑1 (MQ=255)

                catcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgaga                                                                                       <  1:331900‑M2/1‑1 (MQ=255)

                catcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgaga                                                                                       >  2:331900‑M2/74‑74 (MQ=255)

                catcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGa                                                                       >  1:1534759‑M2/74‑90 (MQ=255)

                catcatctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGa                                                                       >  2:1495607‑M2/74‑90 (MQ=255)

                     tctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATc                                                                  >  1:151680‑M2/69‑90 (MQ=255)

                     tctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATc                                                                  <  2:1831663‑M2/22‑1 (MQ=255)

                     tctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATc                                                                  <  1:146257‑M2/22‑1 (MQ=255)

                     tctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATc                                                                  <  2:212444‑M2/22‑1 (MQ=255)

                      ctcaaccggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCt                                                                 >  2:1658150‑M2/68‑90 (MQ=255)

                          accggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCtt                                                             <  1:1658150‑M2/27‑1 (MQ=255)

                          accggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCtt                                                             >  2:439283‑M2/64‑90 (MQ=255)

                             ggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTttat                                                          >  2:223727‑M2/61‑90 (MQ=255)

                             ggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTttat                                                          >  1:1293409‑M2/61‑90 (MQ=255)

                             ggccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGCCGCCATGGAATATCTGCTttat                                                          >  2:1235736‑M2/61‑90 (MQ=255)

                              gccttgccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTttatt                                                         >  2:530212‑M2/60‑90 (MQ=255)

                                   gccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCg                                                    <  2:553872‑M2/36‑1 (MQ=255)

                                   gccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCg                                                    <  1:2040633‑M2/36‑1 (MQ=255)

                                   gccgtcacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCg                                                    <  2:848523‑M2/36‑1 (MQ=255)

                                        cacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGcc                                               <  1:504407‑M2/41‑1 (MQ=255)

                                        cacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGcc                                               >  1:499367‑M2/50‑90 (MQ=255)

                                        cacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGcc                                               >  1:1956875‑M2/50‑90 (MQ=255)

                                        cacgccaagaccggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGcc                                               <  2:1069073‑M2/41‑1 (MQ=255)

                                        cacgccaagaccggctttcactgccgcacgaacagccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGcc                                               <  2:4033‑M2/41‑1 (MQ=255)

                                                    ggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATcg                                   >  1:1459361‑M2/38‑90 (MQ=255)

                                                    ggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATcg                                   >  1:927‑M2/38‑90 (MQ=255)

                                                    ggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATcg                                   >  2:553117‑M2/38‑90 (MQ=255)

                                                    ggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATcg                                   >  1:610488‑M2/38‑90 (MQ=255)

                                                    ggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATcg                                   >  2:1843894‑M2/38‑90 (MQ=255)

                                                    ggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATcg                                   >  2:2063132‑M2/38‑90 (MQ=255)

                                                    ggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATcg                                   >  1:374598‑M2/38‑90 (MQ=255)

                                                    ggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATcg                                   >  2:381804‑M2/38‑90 (MQ=255)

                                                    ggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATcg                                   >  2:881293‑M2/38‑90 (MQ=255)

                                                    ggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATcg                                   >  1:2129288‑M2/38‑90 (MQ=255)

                                                    ggctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGGCGCCAGCACCATATcg                                   >  1:1554717‑M2/38‑90 (MQ=255)

                                                     gctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCg                                                    >  2:1352642‑M2/37‑72 (MQ=255)

                                                     gctttcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCg                                                    <  1:1352642‑M2/36‑1 (MQ=255)

                                                         tcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGaaa                              <  1:995133‑M2/58‑1 (MQ=255)

                                                         tcactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGaaa                              <  2:374598‑M2/58‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGTATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  1:531628‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACTATATCGCGAAAc                             <  1:2080905‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  2:1793605‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  2:490727‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  2:2219871‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  2:927‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  2:253667‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  2:1472636‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  1:977655‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  1:881293‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  1:1843894‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  1:553117‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  1:530212‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  1:2063132‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  1:501976‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  1:281181‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  1:299510‑M2/59‑1 (MQ=255)

                                                          cactgccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  1:447638‑M2/59‑1 (MQ=255)

                                                              gccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCa                                        >  2:1104868‑M2/28‑75 (MQ=255)

                                                              gccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCa                                        <  1:1104868‑M2/48‑1 (MQ=255)

                                                              gccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGc                         >  1:1009536‑M2/28‑90 (MQ=255)

                                                              gccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGc                         >  2:1555949‑M2/28‑90 (MQ=255)

                                                               ccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCtt                                                             <  1:506428‑M2/27‑1 (MQ=255)

                                                               ccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCtt                                                             >  2:506428‑M2/27‑53 (MQ=255)

                                                               ccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCt                        <  2:610488‑M2/64‑1 (MQ=255)

                                                               ccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCt                        <  1:1598126‑M2/64‑1 (MQ=255)

                                                               ccgcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCt                        <  1:167295‑M2/64‑1 (MQ=255)

                                                                 gcacgaacggccggaagcgtcgagAAGCCAGTCGCCa                                                                           <  2:1990019‑M2/13‑1 (MQ=255)

                                                                 gcacgaacggccggaagcgtcgagAAGCCAGTCGCCa                                                                           >  1:1990019‑M2/25‑37 (MQ=255)

                                                                 gcacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAg                      >  1:140960‑M2/25‑90 (MQ=255)

                                                                  cacgaacggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAgg                     <  1:1220144‑M2/67‑1 (MQ=255)

                                                                       acggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGatcat                <  1:586332‑M2/72‑1 (MQ=255)

                                                                        cggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGatcatc               >  2:2018124‑M2/18‑90 (MQ=255)

                                                                         ggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGcc                                               <  1:432029‑M2/41‑1 (MQ=255)

                                                                         ggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGcc                                               >  2:432029‑M2/17‑57 (MQ=255)

                                                                         ggccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATcc              <  1:381804‑M2/74‑1 (MQ=255)

                                                                          gccggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCa             <  1:1495607‑M2/75‑1 (MQ=255)

                                                                            cggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGc           <  1:1682952‑M2/77‑1 (MQ=255)

                                                                            cggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGc           <  1:1696141‑M2/77‑1 (MQ=255)

                                                                            cggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGc           <  2:354405‑M2/77‑1 (MQ=255)

                                                                            cggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGc           <  1:1113905‑M2/77‑1 (MQ=255)

                                                                            cggaagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGc           <  2:1551565‑M2/77‑1 (MQ=255)

                                                                               aagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAAt        <  1:1949907‑M2/80‑1 (MQ=255)

                                                                               aagcgtcgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAAt        <  1:2152506‑M2/80‑1 (MQ=255)

                                                                                     cgagAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAaga  <  1:2140540‑M2/86‑1 (MQ=255)

                                                                                        gAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             <  2:458522‑M2/59‑1 (MQ=255)

                                                                                        gAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAAc                             >  1:458522‑M2/2‑60 (MQ=255)

GTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGA  >  NZ_CP009273/2399383‑2399557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`