| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 3015939 | 23 (1.120) | 4 (0.210) | 3/154 | 1.6 | 17.1% | coding (1265/2871 nt) | xdhD | molybdopterin‑dependent oxidoreductase Mo/Fe‑S‑binding subunit |
| ? | NZ_CP009273 | = 3015996 | 18 (0.970) | coding (1322/2871 nt) | xdhD | molybdopterin‑dependent oxidoreductase Mo/Fe‑S‑binding subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGTACCATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTC > NZ_CP009273/3015916‑3016084 | ggTACCATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGcggcgg > 2:324385/1‑90 (MQ=255) ccATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagt > 1:314495‑M2/1‑77 (MQ=255) ccATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagt > 2:20418‑M2/1‑77 (MQ=255) ccATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGtttt < 1:546288/90‑1 (MQ=255) aTGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTgg > 1:287205/1‑90 (MQ=255) aCTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCa > 2:301854/1‑90 (MQ=255) cgccgcCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTCGGCGGCGGTTTTGGTTCCAAACAg < 1:99497/90‑1 (MQ=255) tCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggtacctgggtggaggc > 2:73723‑M2/1‑55 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggtacctgggtggaggcgtgg > 2:323145‑M2/1‑51 (MQ=255) aTGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGcc > 1:79930/1‑90 (MQ=255) aaaCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTgg < 2:124643/90‑1 (MQ=255) aGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:545988/1‑90 (MQ=255) aGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa < 1:172986/90‑1 (MQ=255) cATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGAcc > 2:234802/1‑90 (MQ=255) cATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGAcc > 2:416292/1‑90 (MQ=255) cATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGAcc > 2:526535/1‑90 (MQ=255) gTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCggg < 1:320458/90‑1 (MQ=255) tAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTcc < 2:388106/90‑1 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTAc < 1:429081/90‑1 (MQ=255) gCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACt < 2:375667/90‑1 (MQ=255) cGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTg > 2:57007/1‑90 (MQ=255) gTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTc < 1:258256/90‑1 (MQ=255) | GGTACCATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTC > NZ_CP009273/3015916‑3016084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |