| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP009273 | 4,609,810 | Δ72 bp | coding (391‑462/1224 nt) | deoB → | phosphopentomutase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 4609809 | 6 (0.140) | 57 (1.400) | 34/156 | 0.1 | 93.8% | coding (390/1224 nt) | deoB | phosphopentomutase |
| ? | NZ_CP009273 | 4609882 = | 2 (0.050) | coding (463/1224 nt) | deoB | phosphopentomutase | |||||
GGTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGA > NZ_CP009273/4609720‑4609892 | ggTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGAT > 1:1008234‑M1/1‑90 (MQ=255)ggTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGAT > 1:4993‑M1/1‑90 (MQ=255)ggTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGAT > 1:301304‑M1/1‑90 (MQ=255) cTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaact > 1:1045918‑M1/1‑85 (MQ=255) cTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaact > 1:1178679‑M1/1‑85 (MQ=255) cTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaact < 2:1136253‑M1/90‑6 (MQ=255) cTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaact < 1:96345‑M1/90‑6 (MQ=255) cTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaact < 1:884731‑M1/90‑6 (MQ=255) cTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaact < 1:442773‑M1/90‑6 (MQ=255) gggAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgg > 2:557818‑M1/1‑83 (MQ=255) aaTTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcga < 1:129487‑M1/90‑12 (MQ=255) aTTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATAAACTGGTCGaa < 2:592112/90‑1 (MQ=255) ttGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaag < 1:444233‑M1/90‑14 (MQ=255) gCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagag > 2:332902‑M1/1‑75 (MQ=255) ccGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagc < 1:666219‑M1/90‑17 (MQ=255) ccGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagc < 2:96774‑M1/90‑17 (MQ=255) ccGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagc < 1:1034581‑M1/90‑17 (MQ=255) ccGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagc < 2:991336‑M1/90‑17 (MQ=255) cGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagca > 1:1225430‑M1/1‑73 (MQ=255) tCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccgg > 1:177‑M1/1‑61 (MQ=255) tGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggca > 1:702956‑M1/1‑59 (MQ=255) tGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggca > 1:841337‑M1/1‑59 (MQ=255) tGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaact > 2:1255595‑M1/1‑59 (MQ=255) tGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaact < 1:1255595‑M1/64‑6 (MQ=255) tGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGtt < 1:264619/90‑1 (MQ=255) tGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagcc < 2:1095918‑M1/90‑36 (MQ=255) gAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccg > 2:111477‑M1/1‑54 (MQ=255) gAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccg > 1:752032‑M1/1‑54 (MQ=255) aGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccga < 2:923647‑M1/90‑38 (MQ=255) gTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgat < 1:638897‑M1/90‑39 (MQ=255) gTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgat < 1:301934‑M1/90‑39 (MQ=255) ggggATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattt > 1:141313‑M1/1‑50 (MQ=255) tatTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctat < 2:207357‑M1/90‑46 (MQ=255) tttCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatac < 2:292284‑M1/90‑48 (MQ=255) tttCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatac < 2:113127‑M1/90‑48 (MQ=255) tctcCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacct < 2:551662‑M1/90‑50 (MQ=255) ctcCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATc > 2:732970‑M1/1‑40 (MQ=255) ctcCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATc < 1:732970‑M1/41‑2 (MQ=255) tcCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctcc > 1:523328‑M1/1‑39 (MQ=255) gATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgct > 2:1019321‑M1/1‑36 (MQ=255) gATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgct > 2:1112778‑M1/1‑36 (MQ=255) gATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgct > 2:535283‑M1/1‑36 (MQ=255) gATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTcc < 2:1131366/90‑1 (MQ=255) aTCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCg > 1:393105/1‑90 (MQ=255) tCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctga < 1:657895‑M1/90‑57 (MQ=255) tCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctga < 2:177‑M1/90‑57 (MQ=255) cACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgac < 2:524384‑M1/90‑58 (MQ=255) cACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgac > 1:399890‑M1/1‑33 (MQ=255) cGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactc < 1:758336‑M1/90‑60 (MQ=255) cGAAAACAGCTTCCCGCAAGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTAc < 2:393105/90‑1 (MQ=255) aaacCAGCTTCCCGCAAGAGCTGCTGGACcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccg < 1:746141‑M1/90‑62 (MQ=255) aaaaCAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccg < 2:412319‑M1/90‑62 (MQ=255) aaaaCAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccg < 2:479597‑M1/90‑62 (MQ=255) aaCAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtg < 2:219487‑M1/90‑64 (MQ=255) aaCAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtg < 2:515967‑M1/90‑64 (MQ=255) gCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgttcc > 1:1024709‑M1/1‑23 (MQ=255) cAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgat < 2:254359‑M1/53‑39 (MQ=255) cAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgat > 1:254359‑M1/1‑15 (MQ=255) agagCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACt < 2:1175472/90‑1 (MQ=255) gctgctGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgttccagattgcctgcca < 1:920827‑M1/90‑81 (MQ=255) gctgctGGATcaactgggcgaagagcacatgaaaaccggcaagccgat < 2:320016‑M1/48‑39 (MQ=255) gctgctGGATcaactgggcgaagagcacatgaaaaccggcaagccgat > 2:795846‑M1/1‑10 (MQ=255) gctgctGGATcaactgggcgaagagcacatgaaaaccggcaagccgat < 1:795846‑M1/48‑39 (MQ=255) gctgctGGATcaactgggcgaagagcacatgaaaaccggcaagccgat > 1:320016‑M1/1‑10 (MQ=255) tgctgGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgttccagattgcctgccatg > 2:534959‑M1/1‑8 (MQ=255) gctgGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgttccagattgcctgccatga > 1:941948‑M1/1‑7 (MQ=255) | GGTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGA > NZ_CP009273/4609720‑4609892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |