| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP009273 | 4,609,810 | Δ72 bp | coding (391‑462/1224 nt) | deoB → | phosphopentomutase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 4609809 | 6 (0.140) | 57 (1.400) | 34/156 | 0.1 | 93.8% | coding (390/1224 nt) | deoB | phosphopentomutase |
| ? | NZ_CP009273 | 4609882 = | 2 (0.050) | coding (463/1224 nt) | deoB | phosphopentomutase | |||||
AGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATGA > NZ_CP009273/4609797‑4609964 | ctgggaaattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACt > 1:1045918‑M2/86‑90 (MQ=255)ctgggaaattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACt > 1:1178679‑M2/86‑90 (MQ=255)ctgggaaattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACt < 2:1136253‑M2/5‑1 (MQ=255)ctgggaaattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACt < 1:96345‑M2/5‑1 (MQ=255)ctgggaaattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACt < 1:884731‑M2/5‑1 (MQ=255)ctgggaaattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACt < 1:442773‑M2/5‑1 (MQ=255)agagCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACt < 2:1175472/90‑1 (MQ=255) gggaaattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTgg > 2:557818‑M2/84‑90 (MQ=255) aattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGa < 1:129487‑M2/11‑1 (MQ=255) ttgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAag < 1:444233‑M2/13‑1 (MQ=255) gccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAagag > 2:332902‑M2/76‑90 (MQ=255) ccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGc < 1:1034581‑M2/16‑1 (MQ=255) ccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGc < 2:991336‑M2/16‑1 (MQ=255) ccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGc < 2:96774‑M2/16‑1 (MQ=255) ccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGc < 1:666219‑M2/16‑1 (MQ=255) cggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGca > 1:1225430‑M2/74‑90 (MQ=255) tctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCgg > 1:177‑M2/62‑90 (MQ=255) tgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACt < 1:1255595‑M2/5‑1 (MQ=255) tgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACt > 2:1255595‑M2/60‑64 (MQ=255) tgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCa > 1:702956‑M2/60‑90 (MQ=255) tgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCa > 1:841337‑M2/60‑90 (MQ=255) tgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGcc < 2:1095918‑M2/35‑1 (MQ=255) gagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCg > 1:752032‑M2/55‑90 (MQ=255) gagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCg > 2:111477‑M2/55‑90 (MQ=255) agtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGa < 2:923647‑M2/37‑1 (MQ=255) gtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt < 1:638897‑M2/38‑1 (MQ=255) gtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt < 1:301934‑M2/38‑1 (MQ=255) ggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAttt > 1:141313‑M2/51‑90 (MQ=255) tatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCtat < 2:207357‑M2/45‑1 (MQ=255) tttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATAc < 2:292284‑M2/47‑1 (MQ=255) tttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATAc < 2:113127‑M2/47‑1 (MQ=255) tctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCt < 2:551662‑M2/49‑1 (MQ=255) ctccgatcacgaaaacagcttcccgcaagagctgctggatc > 2:732970‑M2/41‑41 (MQ=255) ctccgatcacgaaaacagcttcccgcaagagctgctggatc < 1:732970‑M2/1‑1 (MQ=255) tccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTcc > 1:523328‑M2/40‑90 (MQ=255) gatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCt > 2:1112778‑M2/37‑90 (MQ=255) gatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCt > 2:1019321‑M2/37‑90 (MQ=255) gatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCt > 2:535283‑M2/37‑90 (MQ=255) tcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGa < 2:177‑M2/56‑1 (MQ=255) tcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGa < 1:657895‑M2/56‑1 (MQ=255) cacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGAc > 1:399890‑M2/34‑90 (MQ=255) cacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGAc < 2:524384‑M2/57‑1 (MQ=255) cgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTc < 1:758336‑M2/59‑1 (MQ=255) cTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTc > 1:951542/1‑90 (MQ=255) aaaccagcttcccgcaagagctgctggacCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCg < 1:746141‑M2/61‑1 (MQ=255) aaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCg < 2:412319‑M2/61‑1 (MQ=255) aaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCg < 2:479597‑M2/61‑1 (MQ=255) aacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCgtg < 2:219487‑M2/63‑1 (MQ=255) aacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCgtg < 2:515967‑M2/63‑1 (MQ=255) gcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTcc > 1:1024709‑M2/24‑90 (MQ=255) caagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt < 2:254359‑M2/38‑1 (MQ=255) caagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt > 1:254359‑M2/16‑53 (MQ=255) gctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt < 2:320016‑M2/38‑1 (MQ=255) gctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt < 1:795846‑M2/38‑1 (MQ=255) gctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt > 2:795846‑M2/11‑48 (MQ=255) gctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt > 1:320016‑M2/11‑48 (MQ=255) gctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCa < 1:920827‑M2/80‑1 (MQ=255) tgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATg > 2:534959‑M2/9‑90 (MQ=255) gctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATga > 1:941948‑M2/8‑90 (MQ=255) | AGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATGA > NZ_CP009273/4609797‑4609964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |