| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP009273 | 4,609,810 | Δ72 bp | coding (391‑462/1224 nt) | deoB → | phosphopentomutase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 4609809 | 3 (0.190) | 23 (1.540) | 17/156 | 0.1 | 90.6% | coding (390/1224 nt) | deoB | phosphopentomutase |
| ? | NZ_CP009273 | 4609882 = | 2 (0.130) | coding (463/1224 nt) | deoB | phosphopentomutase | |||||
GGTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGAAGAGC > NZ_CP009273/4609720‑4609897 | ggTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGAT > 2:313030‑M1/1‑90 (MQ=255)ggTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGAT > 2:131358‑M1/1‑90 (MQ=255) cTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaact < 2:162188‑M1/90‑6 (MQ=255) cTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaact < 1:71450‑M1/90‑6 (MQ=255) tGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATAAACTg > 1:327636/1‑90 (MQ=255) aaaTTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcg > 2:154230‑M1/1‑80 (MQ=255) ttGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaag < 2:328704‑M1/90‑14 (MQ=255) ccGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagc < 2:336397‑M1/90‑17 (MQ=255) tGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggca > 1:140462‑M1/1‑59 (MQ=255) tGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggca > 2:326513‑M1/1‑59 (MQ=255) gTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaa < 1:197165‑M1/90‑33 (MQ=255) tGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagcc < 1:366359‑M1/90‑36 (MQ=255) tGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagcc < 2:161506‑M1/90‑36 (MQ=255) tGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagcc < 2:302264‑M1/90‑36 (MQ=255) aGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccga > 2:370490‑M1/1‑53 (MQ=255) gTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgat < 2:140462‑M1/90‑39 (MQ=255) ggggATATTTCTCCGATCACGAAAACAGCTTCCCGCGAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattt < 2:304811‑M1/90‑41 (MQ=255) ggATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttc > 2:66082‑M1/1‑48 (MQ=255) cGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgc > 2:119825‑M1/1‑37 (MQ=255) cGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactc < 1:394235‑M1/90‑60 (MQ=255) aaaaCAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccg < 1:326513‑M1/90‑62 (MQ=255) gCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgttcc > 2:17476‑M1/1‑23 (MQ=255) gCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgttcc > 1:329113‑M1/1‑23 (MQ=255) cTTCCCGCAAGAGCTGCTGGATAACCTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCt < 1:251958/90‑1 (MQ=255) ttCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgat > 2:274346‑M1/1‑21 (MQ=255) ttCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgat < 1:274346‑M1/59‑39 (MQ=255) agagCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACt > 2:403766/1‑90 (MQ=255) tgctgGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgttccagattgcctgccatg > 2:245773‑M1/1‑8 (MQ=255) aTcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgttccagattgcctgccatgaagaaa > 1:240985‑M1/1‑2 (MQ=255) | GGTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGAAGAGC > NZ_CP009273/4609720‑4609897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |