| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP009273 | 4,609,810 | Δ72 bp | coding (391‑462/1224 nt) | deoB → | phosphopentomutase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 4609809 | 3 (0.190) | 23 (1.540) | 17/156 | 0.1 | 90.6% | coding (390/1224 nt) | deoB | phosphopentomutase |
| ? | NZ_CP009273 | 4609882 = | 2 (0.130) | coding (463/1224 nt) | deoB | phosphopentomutase | |||||
AGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATGAAGAAACT > NZ_CP009273/4609797‑4609971 | ctgggaaattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACt < 2:162188‑M2/5‑1 (MQ=255)ctgggaaattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACt < 1:71450‑M2/5‑1 (MQ=255)agagCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACt > 2:403766/1‑90 (MQ=255) aaattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCg > 2:154230‑M2/81‑90 (MQ=255) ttgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAag < 2:328704‑M2/13‑1 (MQ=255) ccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGc < 2:336397‑M2/16‑1 (MQ=255) tgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCa > 1:140462‑M2/60‑90 (MQ=255) tgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCa > 2:326513‑M2/60‑90 (MQ=255) gtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCaa < 1:197165‑M2/32‑1 (MQ=255) tgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGcc < 2:161506‑M2/35‑1 (MQ=255) tgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGcc < 1:366359‑M2/35‑1 (MQ=255) tgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGcc < 2:302264‑M2/35‑1 (MQ=255) agtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGa > 2:370490‑M2/54‑90 (MQ=255) gtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt < 2:140462‑M2/38‑1 (MQ=255) ggggatatttctccgatcacgaaaacagcttcccgcgagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAttt < 2:304811‑M2/40‑1 (MQ=255) ggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTc > 2:66082‑M2/49‑90 (MQ=255) cgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGc > 2:119825‑M2/38‑90 (MQ=255) cgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTc < 1:394235‑M2/59‑1 (MQ=255) gCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCg < 1:403766/90‑1 (MQ=255) aaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCg < 1:326513‑M2/61‑1 (MQ=255) gcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTcc > 2:17476‑M2/24‑90 (MQ=255) gcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTcc > 1:329113‑M2/24‑90 (MQ=255) ttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt > 2:274346‑M2/22‑59 (MQ=255) ttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt < 1:274346‑M2/38‑1 (MQ=255) tgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATg > 2:245773‑M2/9‑90 (MQ=255) atCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATGAAGaaa > 1:240985‑M2/3‑90 (MQ=255) cAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATGAAGAAACt > 2:148250/1‑90 (MQ=255) | AGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATGAAGAAACT > NZ_CP009273/4609797‑4609971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |