| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NZ_CP009273 | 4,609,810 | Δ72 bp | coding (391‑462/1224 nt) | deoB → | phosphopentomutase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NZ_CP009273 | 4609810 | 4609881 | 72 | 36 [0] | [0] 36 | deoB | phosphopentomutase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 4609809 | 0 (0.000) | 36 (1.270) | 25/158 | 0.1 | 100% | coding (390/1224 nt) | deoB | phosphopentomutase |
| ? | NZ_CP009273 | 4609882 = | 0 (0.000) | coding (463/1224 nt) | deoB | phosphopentomutase | |||||
GTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGA > NZ_CP009273/4609721‑4609892 | gTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATc < 2:507063‑M1/90‑2 (MQ=255) cTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaact > 2:641448‑M1/1‑85 (MQ=255) aaTTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcga < 2:728957‑M1/90‑12 (MQ=255) tGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaaga < 2:808957‑M1/90‑15 (MQ=255) ccGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagc < 1:505699‑M1/90‑17 (MQ=255) cGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagca > 1:795792‑M1/1‑73 (MQ=255) tGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggca > 1:569233‑M1/1‑59 (MQ=255) tGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggca > 1:163326‑M1/1‑59 (MQ=255) tGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagcc < 2:795792‑M1/90‑36 (MQ=255) aGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcatatgaaaaccggcaagccga < 2:459160‑M1/90‑38 (MQ=255) aGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccga > 2:43590‑M1/1‑53 (MQ=255) aGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccga > 2:41359‑M1/1‑53 (MQ=255) gTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgat < 1:178643‑M1/90‑39 (MQ=255) ggggATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattt < 1:325003‑M1/90‑41 (MQ=255) ggggATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattt > 1:397045‑M1/1‑50 (MQ=255) ggggATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattt > 1:434862‑M1/1‑50 (MQ=255) ggggATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattt > 2:63155‑M1/1‑50 (MQ=255) ggATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttc > 1:762917‑M1/1‑48 (MQ=255) ggATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttc > 2:630262‑M1/1‑48 (MQ=255) gATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttct < 1:523885‑M1/90‑44 (MQ=255) tctcCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacct < 1:106326‑M1/90‑50 (MQ=255) tctcCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacct < 2:104950‑M1/90‑50 (MQ=255) ccGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccg > 1:106019‑M1/1‑38 (MQ=255) ccGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccg > 2:837328‑M1/1‑38 (MQ=255) gATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgct > 2:58965‑M1/1‑36 (MQ=255) gATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttccatacctccgct > 1:527170‑M1/1‑36 (MQ=255) gATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgat < 2:36996‑M1/74‑39 (MQ=255) gATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgat > 1:36996‑M1/1‑36 (MQ=255) tCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctga < 2:511379‑M1/90‑57 (MQ=255) aaaaCAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccg < 2:609262‑M1/90‑62 (MQ=255) cAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgtt > 2:390765‑M1/1‑25 (MQ=255) cAGCTTCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgtt > 2:618198‑M1/1‑25 (MQ=255) ttCCCGCAAGAGCTGCTGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgttccag > 1:774390‑M1/1‑21 (MQ=255) gctgctGGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgttccagattgcctgcca < 1:783760‑M1/90‑81 (MQ=255) tgctgGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgttccagattgcctgccatg > 1:383680‑M1/1‑8 (MQ=255) gctgGATcaactgggcgaagagcacatgaaaaccggcaagccgattttctatacctccgctgactccgtgttccagattgcctgccatga > 1:481096‑M1/1‑7 (MQ=255) | GTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGA > NZ_CP009273/4609721‑4609892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |