| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NZ_CP009273 | 4,609,810 | Δ72 bp | coding (391‑462/1224 nt) | deoB → | phosphopentomutase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NZ_CP009273 | 4609810 | 4609881 | 72 | 36 [0] | [0] 36 | deoB | phosphopentomutase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 4609809 | 0 (0.000) | 36 (1.270) | 25/158 | 0.1 | 100% | coding (390/1224 nt) | deoB | phosphopentomutase |
| ? | NZ_CP009273 | 4609882 = | 0 (0.000) | coding (463/1224 nt) | deoB | phosphopentomutase | |||||
CGCAAGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATGA > NZ_CP009273/4609793‑4609964 | gtcactgggaaattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatc < 2:507063‑M2/1‑1 (MQ=255) ctgggaaattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACt > 2:641448‑M2/86‑90 (MQ=255) aattgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGa < 2:728957‑M2/11‑1 (MQ=255) tgccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAaga < 2:808957‑M2/14‑1 (MQ=255) ccggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGc < 1:505699‑M2/16‑1 (MQ=255) cggtgtcccggttctgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGca > 1:795792‑M2/74‑90 (MQ=255) tgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCa > 1:569233‑M2/60‑90 (MQ=255) tgtttgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCa > 1:163326‑M2/60‑90 (MQ=255) tgagtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGcc < 2:795792‑M2/35‑1 (MQ=255) agtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCATATGAAAACCGGCAAGCCGa < 2:459160‑M2/37‑1 (MQ=255) agtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGa > 2:43590‑M2/54‑90 (MQ=255) agtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGa > 2:41359‑M2/54‑90 (MQ=255) gtggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt < 1:178643‑M2/38‑1 (MQ=255) ggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAttt < 1:325003‑M2/40‑1 (MQ=255) ggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAttt > 1:397045‑M2/51‑90 (MQ=255) ggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAttt > 1:434862‑M2/51‑90 (MQ=255) ggggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAttt > 2:63155‑M2/51‑90 (MQ=255) ggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTc > 1:762917‑M2/49‑90 (MQ=255) ggatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTc > 2:630262‑M2/49‑90 (MQ=255) gatatttctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCt < 1:523885‑M2/43‑1 (MQ=255) tctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCt < 1:106326‑M2/49‑1 (MQ=255) tctccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCt < 2:104950‑M2/49‑1 (MQ=255) ccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCg > 1:106019‑M2/39‑90 (MQ=255) ccgatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCg > 2:837328‑M2/39‑90 (MQ=255) gatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt < 2:36996‑M2/38‑1 (MQ=255) gatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGAt > 1:36996‑M2/37‑74 (MQ=255) gatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCt > 2:58965‑M2/37‑90 (MQ=255) gatcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCCATACCTCCGCt > 1:527170‑M2/37‑90 (MQ=255) tcacgaaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGa < 2:511379‑M2/56‑1 (MQ=255) aaaacagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCg < 2:609262‑M2/61‑1 (MQ=255) cagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGtt > 2:390765‑M2/26‑90 (MQ=255) cagcttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGtt > 2:618198‑M2/26‑90 (MQ=255) ttcccgcaagagctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAg > 1:774390‑M2/22‑90 (MQ=255) gctgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCa < 1:783760‑M2/80‑1 (MQ=255) tgctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATg > 1:383680‑M2/9‑90 (MQ=255) gctggatCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATga > 1:481096‑M2/8‑90 (MQ=255) | CGCAAGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATGA > NZ_CP009273/4609793‑4609964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |