| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 3629105 | 0 (0.000) | 38 (1.430) | 20/170 | 0.2 | 100% | coding (905/1053 nt) | yhiM | DUF2776 domain‑containing protein |
| ? | NZ_CP009273 | 3645397 = | NA (NA) | pseudogene (747/747 nt) | BW25113_RS18155 | hypothetical protein | |||||
AAGTCTGGCTACTGGCACTGGTATGGAGACGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/3629018‑3629105‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGC > NZ_CP009273/3645397‑3645485 AAGTCTGGCTACTGGCACTGGTATGGAGACGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGA < 1:345646/90‑1 AGTCTGGCTACTGGCACTGGTATGGAGACGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAA < 2:543986/90‑1 CGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCGCCTGCCTGTTTTGGAA < 2:515954/62‑1 CGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC > 2:98209/1‑90 CGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC > 2:84864/1‑90 CGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC > 2:668428/1‑90 CGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC > 2:177227/1‑90 CGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC > 1:678631/1‑90 CGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC > 1:678630/1‑90 CGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC > 1:335650/1‑90 CGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGC < 1:598219/75‑1 CGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGC > 2:598219/1‑75 CGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAA > 1:515954/1‑62 GTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCG > 1:180591/1‑90 GTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCG > 2:644856/1‑90 GTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCG > 1:415970/1‑90 GTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGGCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCG > 1:350172/1‑90 ACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGC < 1:679400/90‑1 GTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC > 1:452507/1‑90 GTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC > 2:71521/1‑90 GTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAG > 2:38421/1‑90 CCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATT < 2:133390/90‑1 ACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCA > 2:432004/1‑90 AGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATT < 2:214941/90‑1 ATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCT > 2:11242/1‑90 ACCGATGATTCCCGTCTTCCCCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTC < 1:460510/90‑1 ACCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTC < 2:65910/90‑1 CCGATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCA > 2:43291/1‑90 GATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGGAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATG > 1:472427/1‑90 GATGATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATG > 1:569709/1‑90 GATTCCCGTCTTCACCTGCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTTTCGGCTGACTCAGTCATTTCATTTCTTCATGTTT > 2:174202/1‑90 GCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCC > 2:154221/1‑90 GCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCC < 2:580878/90‑1 GCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGC < 2:325482/77‑1 GCCTGTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGC > 1:325482/1‑77 GCCTCTTTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCC > 2:215377/1‑90 TTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAA < 1:11242/90‑1 TTTGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAA < 1:142992/90‑1 GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGC > 2:145123/1‑90 GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGC > 2:78839/1‑90 GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGC > 1:131578/1‑90 AAGTCTGGCTACTGGCACTGGTATGGAGACGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/3629018‑3629105‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGC > NZ_CP009273/3645397‑3645485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |