Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3635965	3636096	132	3 [1]	[1] 2	rsmJ	16S rRNA (guanine(1516)‑N(2))‑methyltransferase RsmJ

ATCCATCGGCATCAAGATCCGGTCCCACCAGCGACTGAAAGACACGCATCTCTTTTTTCACTAGCGCGCTTTTCTGCTTATGCGGGAACATCGGGTCGAGATAAACCACCTGCGGGCGCGGGGT  >  NZ_CP009273/3635886‑3636009                                                                               |                                              aTCCATCGGCATCAAGATCCGGTCCCACCAGCGACTGAAAGACACGCATCTCTTTTTTCACTAGCGCGCTTTTCTGCtt                                               >  1:341975/1‑79 (MQ=255) aTCCATCGGCATCAAGATCCGGTCCCACCAGCGACTGAAAGACACGCATCTCTTTTTTCACTAGCGCGCTTTTCTGCtt                                               <  2:341975/79‑1 (MQ=255)                                   cTGAAAGACACGCATCTCTTTTTTCACTAGCGCGCTTTTCTGCTTATGCGGGAACATCGGGTCGAGATAAACCACCTGCGGGCGCGGGGt  <  1:517576/90‑1 (MQ=255)                                                                               |                                              ATCCATCGGCATCAAGATCCGGTCCCACCAGCGACTGAAAGACACGCATCTCTTTTTTCACTAGCGCGCTTTTCTGCTTATGCGGGAACATCGGGTCGAGATAAACCACCTGCGGGCGCGGGGT  >  NZ_CP009273/3635886‑3636009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑