BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,976,527	Δ776 bp		insB1–insA	insB1, insA

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1976527–1977294	1977302	9–776	492 [0]	[0] 495	insB1–insA	insB1,insA

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1976526	0 (0.000)	446 (0.790)	162/184	0.3	100%	intergenic (‑305/+16)	flhD/insB1	DNA‑binding transcriptional dual regulator with FlhC/IS1 transposase B
*	?	NC_000913	1977303 =	0 (0.000)	446 (0.790)	162/184	0.3	100%	intergenic (‑64/‑474)	insA/uspC	IS1 repressor TnpA/universal stress protein

Only 100 of 492 total aligned reads displayed.

ACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGT  >  NC_000913/1976426‑1976626

aCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATG                                                                                                      >  1:1945493‑M1/1‑101 (MQ=255)

  tGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGta                                                                                                    <  2:3564974‑M1/101‑3 (MQ=255)

  tGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGta                                                                                                    <  2:3253177‑M1/101‑3 (MQ=255)

   gTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtat                                                                                                   <  2:3139429‑M1/101‑4 (MQ=255)

   gTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtat                                                                                                   >  2:7039743‑M1/1‑98 (MQ=255)

   gTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGnnn                                                                                                   >  2:11917587‑M1/1‑98 (MQ=255)

      cTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataag                                                                                                <  2:6196920‑M1/101‑7 (MQ=255)

        cGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtc                                                                                              <  1:5143925‑M1/101‑9 (MQ=255)

         gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtca                                                                                             >  1:7229631‑M1/1‑92 (MQ=255)

          tCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcat                                                                                            >  1:1585445‑M1/1‑91 (MQ=255)

            aCTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatac                                                                                          >  1:1208631‑M1/1‑89 (MQ=255)

            aCTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatac                                                                                          <  1:5605724‑M1/101‑13 (MQ=255)

            aCTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcannn                                                                                          >  2:8700162‑M1/1‑89 (MQ=255)

             cTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatact                                                                                         <  1:9422289‑M1/101‑14 (MQ=255)

              tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatactt                                                                                        >  1:6077888‑M1/1‑87 (MQ=255)

               acacGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttt                                                                                       >  1:4562300‑M1/1‑86 (MQ=255)

                cacGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatactttt                                                                                      >  1:14703573‑M1/1‑85 (MQ=255)

                  cGCACCTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgt                                                                                    <  1:3858587‑M1/101‑19 (MQ=255)

                  cGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgt                                                                                    <  1:3312250‑M1/101‑19 (MQ=255)

                      caTACAACGGAGGAGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttnnn                                                                                >  2:14295412‑M1/1‑79 (MQ=255)

                           aaCGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgt                                                                           >  1:3020342‑M1/1‑74 (MQ=255)

                               nnngggggctgCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtattt                                                                       <  2:7518284‑M1/98‑32 (MQ=255)

                                aGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttc                                                                      <  1:14120194‑M1/101‑33 (MQ=255)

                                aGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatnnn                                                                      >  2:8791595‑M1/1‑69 (MQ=255)

                                 ggggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttca                                                                     <  1:3702683‑M1/101‑34 (MQ=255)

                                  gggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaa                                                                    >  2:4638859‑M1/1‑67 (MQ=255)

                                      gCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctg                                                                <  1:5423464‑M1/101‑39 (MQ=255)

                                      gCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctg                                                                <  1:12678492‑M1/101‑39 (MQ=255)

                                      gCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctg                                                                <  1:7416721‑M1/101‑39 (MQ=255)

                                        tGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtt                                                              <  1:7740971‑M1/101‑41 (MQ=255)

                                         gCGNTTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttn                                                             >  1:5738469‑M1/1‑60 (MQ=255)

                                           gATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaa                                                           <  1:10937332‑M1/101‑44 (MQ=255)

                                           gATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaa                                                           >  2:3322077‑M1/1‑58 (MQ=255)

                                            aTTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaa                                                          <  1:641340‑M1/101‑45 (MQ=255)

                                             ttttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaa                                                         >  1:1049435‑M1/1‑56 (MQ=255)

                                                tCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtt                                                      <  1:11159732‑M1/101‑49 (MQ=255)

                                                   nnnatgcgTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttttt                                                   <  2:13560855‑M1/98‑52 (MQ=255)

                                                   nnnatgcgTGATGCAGAGCACACAAAACACTCAATTACTTAACATAAATGtatacgtcatacttttgttttgggtgtatttcaatctgttaaaaagttttt                                                   <  2:12466934‑M1/98‑52 (MQ=255)

                                                   ataatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttttt                                                   >  1:3248231‑M1/1‑50 (MQ=255)

                                                    taatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggcgtatttcaatctgttaaaaagtttttc                                                  >  2:3936762‑M1/1‑49 (MQ=255)

                                                     aatGCGTGATGCAGATCACACAAAACCCTCAATTCCTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcg                                                 <  1:6259051‑M1/101‑54 (MQ=255)

                                                     aatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttttnnn                                                 >  2:14082575‑M1/1‑48 (MQ=255)

                                                       tGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgct                                               <  1:2584491‑M1/101‑56 (MQ=255)

                                                       tGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgct                                               <  2:419640‑M1/101‑56 (MQ=255)

                                                         nnngatgCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctac                                             <  2:11571820‑M1/98‑58 (MQ=255)

                                                         cGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctac                                             <  1:9770933‑M1/101‑58 (MQ=255)

                                                         cGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctac                                             <  1:14363018‑M1/101‑58 (MQ=255)

                                                         cGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgcnnn                                             >  2:14554696‑M1/1‑44 (MQ=255)

                                                         cGTGATGCAGACCACACAAAACCCTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctac                                             <  2:5257807‑M1/101‑58 (MQ=255)

                                                          gTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctnnn                                            >  2:9259527‑M1/1‑43 (MQ=255)

                                                          gTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacg                                            >  1:11648337‑M1/1‑43 (MQ=255)

                                                          gTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacg                                            <  1:1823816‑M1/101‑59 (MQ=255)

                                                           tGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgc                                           <  1:8514409‑M1/101‑60 (MQ=255)

                                                            gATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgct                                          >  1:13023470‑M1/1‑41 (MQ=255)

                                                             aTGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgcta                                         <  2:5477694‑M1/101‑62 (MQ=255)

                                                             aTGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgcta                                         <  2:1585445‑M1/101‑62 (MQ=255)

                                                               ggagaTCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctnnn                                       >  2:10853113‑M1/3‑38 (MQ=255)

                                                                ctgatCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctannn                                      >  2:14703379‑M1/3‑37 (MQ=255)

                                                                cAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctannn                                      >  2:13798038‑M1/1‑37 (MQ=255)

                                                                cAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagca                                      >  1:426901‑M1/1‑37 (MQ=255)

                                                                 aGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaa                                     >  1:10027210‑M1/1‑36 (MQ=255)

                                                                  nnncacacaaaaCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaag                                    <  2:12788044‑M1/98‑67 (MQ=255)

                                                                   aTCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagc                                   <  2:5053981‑M1/101‑68 (MQ=255)

                                                                    tCACACAAAACACTCAATTACTTAACATAAATGcataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaannn                                  >  2:13278288‑M1/1‑33 (MQ=255)

                                                                       cgcaaaACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcannn                               >  2:10581163‑M1/3‑30 (MQ=255)

                                                                       cacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtttaaaagtttttcgctacgctagcaagcaaaa                               >  1:2931753‑M1/1‑30 (MQ=255)

                                                                       cacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaa                               >  1:7924837‑M1/1‑30 (MQ=255)

                                                                       cacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaa                               <  2:1945493‑M1/101‑72 (MQ=255)

                                                                        acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaa                              <  1:7039743‑M1/101‑73 (MQ=255)

                                                                        acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaa                              >  2:4518377‑M1/1‑29 (MQ=255)

                                                                         caAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaannn                             >  2:14452629‑M1/1‑28 (MQ=255)

                                                                         caAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaat                             >  2:2200602‑M1/1‑28 (MQ=255)

                                                                             acacTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaa                         <  1:1372077‑M1/101‑78 (MQ=255)

                                                                             acacTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaa                         <  1:917314‑M1/101‑78 (MQ=255)

                                                                              cacTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaac                        <  1:8227399‑M1/101‑79 (MQ=255)

                                                                               acTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaaca                       >  1:6843954‑M1/1‑22 (MQ=255)

                                                                                cTCAATTACTTAACATAAATGtataagtcatgcttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacag                      <  1:8855295‑M1/101‑81 (MQ=255)

                                                                                cTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacag                      >  2:582008‑M1/1‑21 (MQ=255)

                                                                                cTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacag                      <  1:10341181‑M1/101‑81 (MQ=255)

                                                                                  cAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacagga                    >  2:279888‑M1/1‑19 (MQ=255)

                                                                                  cAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacagga                    <  2:3020342‑M1/101‑83 (MQ=255)

                                                                                   aaTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaa                   >  2:891564‑M1/1‑18 (MQ=255)

                                                                                     ttACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtcaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaata                 <  1:10709650‑M1/101‑86 (MQ=255)

                                                                                     nnncttaACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaata                 <  2:7951138‑M1/98‑86 (MQ=255)

                                                                                        nnnaacatAAATGtataagtcattattttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatc              <  2:9708961‑M1/98‑89 (MQ=255)

                                                                                         ttAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcg             >  1:13939891‑M1/1‑12 (MQ=255)

                                                                                         ttAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcg             >  2:902362‑M1/1‑12 (MQ=255)

                                                                                           agcatAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcnnn           >  2:11390214‑M1/3‑10 (MQ=255)

                                                                                           aaCATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaa           >  1:4883683‑M1/1‑10 (MQ=255)

                                                                                            aCATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaa          <  1:2253437‑M1/101‑93 (MQ=255)

                                                                                             cATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaat         >  1:2462296‑M1/1‑8 (MQ=255)

                                                                                             cATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaat         >  1:12750246‑M1/1‑8 (MQ=255)

                                                                                              aTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaannn        >  2:10164541‑M1/1‑7 (MQ=255)

                                                                                               tAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgg       <  2:6737784‑M1/101‑96 (MQ=255)

                                                                                               tAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgg       >  1:13429160‑M1/1‑6 (MQ=255)

                                                                                               tAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataat               >  2:6520002‑M1/1‑6 (MQ=255)

                                                                                                 aaTGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatggga     >  1:12292284‑M1/1‑4 (MQ=255)

                                                                                                    gtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgt  >  1:9700299‑M1/1‑1 (MQ=255)

                                                                                                    gtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggannn  >  2:8249417‑M1/1‑1 (MQ=255)

                                                                                                    gtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggannn  >  2:8545971‑M1/1‑1 (MQ=255)

ACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGT  >  NC_000913/1976426‑1976626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`