BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	4,092,014	3461 bp→GCATGCGGATCCTCTAGAGTCGACATATG		[rhaD]–rhaB	[rhaD], rhaA, rhaB

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	4092014	4095474	3461	270 [0]	[1] 274	[rhaD]–rhaB	[rhaD],rhaA,rhaB

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4092013	0 (0.000)	182 (1.010) +GCATGCGGATCCTCTAGAGTCGACATATG	96/116	0.0	99.8%	coding (283/825 nt)	rhaD	rhamnulose‑1‑phosphate aldolase
*	?	NC_000913	4095475 =	1 (0.000)	182 (1.010) +GCATGCGGATCCTCTAGAGTCGACATATG	96/116	0.0	99.8%	intergenic (‑4/‑284)	rhaB/rhaS	rhamnulokinase/DNA‑binding transcriptional activator for rhaBAD and rhaT, L‑rhamnose‑binding

Only 100 of 274 total aligned reads displayed.

GGCTGCGGCATTCACGCTCGTAACGCGCCAGCATCACGCGCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCA  >  NC_000913/4095384‑4095567

gtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatggta                                                                                            >  1:915549‑M2/92‑93 (MQ=255)

   aggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATc                                                                                         <  1:5346880‑M2/6‑1 (MQ=255)

     tacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCct                                                                                       <  1:2533748‑M2/8‑1 (MQ=255)

         gcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATcctgctc                                                                                   >  1:5846184‑M2/83‑93 (MQ=255)

         gcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATcctgcta                                                                                   >  1:2247492‑M2/83‑93 (MQ=255)

           ttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGt                                                                                             >  2:3059141‑M2/81‑82 (MQ=255)

            tcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTgaaa                                                                                >  1:3091339‑M2/80‑93 (MQ=255)

             cgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGa                                                                                           >  2:711431‑M2/79‑82 (MQ=255)

             cgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGa                                                                                           <  2:5398368‑M2/4‑1 (MQ=255)

             cgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAatg                                                                               >  1:3786200‑M2/79‑93 (MQ=255)

             agttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAAtt                                                                               <  1:1091249‑M2/16‑1 (MQ=255)

              gttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAattc                                                                              >  1:6048331‑M2/78‑93 (MQ=255)

                tggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCa                                                                            <  1:473181‑M2/19‑1 (MQ=255)

                 cgttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCAt                                                                           <  1:6964579‑M2/20‑1 (MQ=255)

                  gttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCata                                                                          >  1:3886831‑M2/74‑93 (MQ=255)

                  gttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCAtt                                                                          >  1:1247195‑M2/74‑94 (MQ=255)

                   ataacccccaaagaacgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTa                                                                         <  1:2351692‑M2/22‑1 (MQ=255)

                    taacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCctgct                                                                                    >  2:1023702‑M2/72‑82 (MQ=255)

                    taacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCctgct                                                                                    <  2:1583379‑M2/11‑1 (MQ=255)

                    gaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTAc                                                                        <  1:628411‑M2/23‑1 (MQ=255)

                    caacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTAc                                                                        <  1:2692902‑M2/23‑1 (MQ=255)

                     aacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCctgctg                                                                                   >  2:6932912‑M2/71‑82 (MQ=255)

                      gcccccaaagaatgtggtagcccgcgccgtccctgtcgacgcatgcggatcctctagtgtcgacatatgGTGATCCTGCTGAATTTCATTACGa                                                                      <  1:3174907‑M2/25‑1 (MQ=255)

                      acccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGa                                                                                  >  2:4611987‑M2/70‑82 (MQ=255)

                       tccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGAc                                                                     <  1:4035074‑M2/26‑1 (MQ=255)

                       cccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGaa                                                                                 <  2:351194‑M2/14‑1 (MQ=255)

                       cccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGAc                                                                     >  1:5016199‑M2/69‑94 (MQ=255)

                        ccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGAcc                                                                    >  1:7271299‑M2/68‑94 (MQ=255)

                         cccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAAtt                                                                               <  2:5940288‑M2/16‑1 (MQ=255)

                          ccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAAttt                                                                              <  2:7383054‑M2/17‑1 (MQ=255)

                           caaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTc                                                                             >  2:7296890‑M2/65‑82 (MQ=255)

                            aaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCa                                                                            >  2:903379‑M2/64‑82 (MQ=255)

                             aagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCAt                                                                           <  2:2320358‑M2/20‑1 (MQ=255)

                               gaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTa                                                                         >  2:5812118‑M2/61‑82 (MQ=255)

                               gaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTa                                                                         <  2:2176863‑M2/22‑1 (MQ=255)

                               gaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTa                                                                         >  2:1500541‑M2/61‑82 (MQ=255)

                               gaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTaa                                                             >  1:2121393‑M2/61‑94 (MQ=255)

                                catgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTaaa                                                            <  1:4832828‑M2/35‑1 (MQ=255)

                                aatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTAc                                                                        >  2:5494585‑M2/60‑82 (MQ=255)

                                   gtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGCATTTCATTACGAc                                                                     >  2:4151269‑M2/57‑82 (MQ=255)

                                    cggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAgc                                                        <  1:4604978‑M2/39‑1 (MQ=255)

                                      gtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAg                                                                  <  2:378147‑M2/29‑1 (MQ=255)

                                      agagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAgcgc                                                      <  1:4270546‑M2/41‑1 (MQ=255)

                                       tagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGt                                                                 <  2:2071809‑M2/30‑1 (MQ=255)

                                       gagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGcc                                                     <  1:3277854‑M2/42‑1 (MQ=255)

                                        ggcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCt                                                    <  1:3116201‑M2/43‑1 (MQ=255)

                                        agcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCt                                                    >  1:1379119‑M2/52‑94 (MQ=255)

                                         gcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTg                                                   >  1:291483‑M2/51‑94 (MQ=255)

                                           tcgcgccgtcgctgtcgacgcatgcgtatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCctgca                                                 <  1:7201397‑M2/46‑3 (MQ=255)

                                           ccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTgat                                                 >  1:2015757‑M2/49‑93 (MQ=255)

                                              cgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAatta                                              >  1:1677490‑M2/46‑93 (MQ=255)

                                               tccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTcg                                             <  1:3226119‑M2/50‑1 (MQ=255)

                                                ccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATtcga                                            >  1:7339276‑M2/44‑93 (MQ=255)

                                                ccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATtcga                                            >  1:3444545‑M2/44‑93 (MQ=255)

                                                 cgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAgcg                                                       >  2:2731323‑M2/43‑82 (MQ=255)

                                                  gtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAgcgc                                                      >  2:4490737‑M2/42‑82 (MQ=255)

                                                   tcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGcc                                                     >  2:6563029‑M2/41‑82 (MQ=255)

                                                    ggctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGAcc                                        <  1:5715798‑M2/55‑1 (MQ=255)

                                                    cgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCt                                                    <  2:3010720‑M2/43‑1 (MQ=255)

                                                     gctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTg                                                   >  2:4972381‑M2/39‑82 (MQ=255)

                                                      ctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGa                                                  >  2:6105265‑M2/38‑82 (MQ=255)

                                                      ctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGa                                                  <  2:6299252‑M2/45‑1 (MQ=255)

                                                       tgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGaa                                                 <  2:1762146‑M2/46‑1 (MQ=255)

                                                       tgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTtc                                     <  1:756555‑M2/58‑1 (MQ=255)

                                                        ttcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTtct                                    <  1:174132‑M2/59‑1 (MQ=255)

                                                        ctcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTtct                                    <  1:5472028‑M2/59‑1 (MQ=255)

                                                         tcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCttctt                                   >  1:6388975‑M2/35‑93 (MQ=255)

                                                         acgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTtctc                                   <  1:2069827‑M2/60‑1 (MQ=255)

                                                          cgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTc                                              >  2:5687171‑M2/34‑82 (MQ=255)

                                                           tacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGt                                 <  1:4079523‑M2/62‑1 (MQ=255)

                                                            acgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTcgc                                            >  2:6018413‑M2/32‑82 (MQ=255)

                                                             cgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTcgcg                                           <  2:4541714‑M2/52‑1 (MQ=255)

                                                             cgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTcgcg                                           >  2:4683778‑M2/31‑82 (MQ=255)

                                                               gatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACt                             <  1:2412204‑M2/66‑1 (MQ=255)

                                                               aatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACt                             <  1:5419432‑M2/66‑1 (MQ=255)

                                                                 tgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCt                                       <  2:263522‑M2/56‑1 (MQ=255)

                                                                  gcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCtt                                      <  2:7067304‑M2/57‑1 (MQ=255)

                                                                  gcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCtt                                      <  2:5214117‑M2/57‑1 (MQ=255)

                                                                  gcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGAc                          <  1:5949847‑M2/69‑1 (MQ=255)

                                                                   cggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTtc                                     <  2:6675933‑M2/58‑1 (MQ=255)

                                                                    ggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGAcat                        >  1:4205460‑M2/24‑93 (MQ=255)

                                                                    ggatcctctagagtcgacatatgGTGATCCTGCCGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGAcac                        >  1:6868829‑M2/24‑93 (MQ=255)

                                                                      atcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACaggg                      >  1:5823923‑M2/22‑93 (MQ=255)

                                                                      atcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGa                      >  1:1037278‑M2/22‑94 (MQ=255)

                                                                         ctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGgaaat                   >  1:7025365‑M2/19‑93 (MQ=255)

                                                                          tctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTAc                              <  2:1546964‑M2/65‑1 (MQ=255)

                                                                          tctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAAt                  <  1:3605293‑M2/77‑1 (MQ=255)

                                                                          cctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAAt                  <  1:2731826‑M2/77‑1 (MQ=255)

                                                                             agagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGa                           >  2:1226326‑M2/15‑82 (MQ=255)

                                                                              gagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGAc                          >  2:5759243‑M2/14‑82 (MQ=255)

                                                                                ttcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCa            <  1:6204877‑M2/83‑1 (MQ=255)

                                                                                gtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAg                        >  2:686638‑M2/12‑82 (MQ=255)

                                                                                 tcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAgg                       >  2:3425361‑M2/11‑82 (MQ=255)

                                                                                  cgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGa                      <  2:814364‑M2/73‑1 (MQ=255)

                                                                                  cgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCAtt          <  1:6591008‑M2/85‑1 (MQ=255)

                                                                                     catatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATtggg       >  1:1928722‑M2/7‑93 (MQ=255)

                                                                                      atatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAAt                  <  2:7336322‑M2/77‑1 (MQ=255)

                                                                                          tgtgATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCa  <  1:7422097/94‑1 (MQ=255)

                                                                                           gtgATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGcc             <  2:7046323/82‑1 (MQ=255)

                                                                                           gtgATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGcc             >  2:3987393/1‑82 (MQ=255)

GGCTGCGGCATTCACGCTCGTAACGCGCCAGCATCACGCGCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCA  >  NC_000913/4095384‑4095567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`