| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2116282 = | 292 (0.980) | 3 (0.010) | 3/178 | 44.3 | 1.1% | coding (147/1281 nt) | wcaK | colanic acid biosynthesis protein |
| ? | NC_000913 | 4192345 = | 275 (1.040) | coding (1778/1896 nt) | thiC | thiamin (pyrimidine moiety) biosynthesis protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AATCGTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2116392‑2116282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcctggctgATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGCGGTAA > NC_000913/4192345‑4192444 AATCGTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTC > 2:6011916/1‑101AATCGTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTC > 1:6284436/1‑101AATCGTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTC > 1:2250373/1‑101 CGTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTC > 1:4517932/1‑101 CGTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTC > 1:4237905/1‑101 CGTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTC > 1:4381992/1‑101 GTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCC < 1:903834/101‑1 GTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCC > 1:2128861/1‑101 GTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCC > 1:624154/1‑101 GTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCC < 1:4613949/101‑1 GTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCC > 1:4047211/1‑101 GTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCCCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCC < 1:1337519/101‑1 TGGCGCCAGCGCCATCCTGCGCGGCTTCCTTGATGCCATCAACATCCTCAATCCCCACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCT < 2:4699412/101‑1 TGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCT > 2:1417679/1‑101 GGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTG < 2:5116620/101‑1 GGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTG > 1:5309031/1‑101 GCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGG < 1:1146320/101‑1 GCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGG > 2:5581779/1‑101 CGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGAGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGC > 1:3540541/1‑101 GACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGCT > 2:6483850/1‑101 GACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGCT > 1:2977391/1‑101 GACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGCT > 2:6313371/1‑101 GACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGCGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGCT > 2:6682696/1‑101 GACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAACCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGCT < 2:3650372/101‑1 TGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGCTGATTTTCATCGAGCAGAATTTC > 2:662773/1‑62 TGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGCTGATTTTCATCGAGCAGAATTTC < 1:662773/62‑1 cTCTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAG < 1:2107351/100‑1 cCTTCCTGGTTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGC < 2:3561956/100‑1 CTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGTCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCG < 2:5861522/101‑1 CTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCG > 1:4505207/1‑101 TTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGC > 1:6961205/1‑101 TCCTGGCTGATTTTCATCGAGGAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGCTTCATCGTGATAAGCGCG > 1:4685359/1‑101 TCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATTGTGGTAAGCGCG > 2:6126278/1‑101 TCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCG < 1:3706254/101‑1 CCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGG < 2:3505959/101‑1 CCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGG < 2:37376/101‑1 CTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGG < 2:5951544/101‑1 TGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGC < 2:4268227/101‑1 TGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGC > 1:613158/1‑101 TGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGC < 1:5319982/101‑1 TGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGC > 1:529259/1‑101 GGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGGTTCATCGTGATAAGCGCGGGCG > 1:4375768/1‑101 GCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGCGG < 2:6288750/101‑1 GCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGCGG > 1:1634030/1‑101 TGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGGCTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGCGGTA < 1:4268852/101‑1 TGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGCGGga > 2:4352559/1‑99 TGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGCGGTA > 1:574356/1‑101 TGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGCTTCATCGTGATAAGCGCGGGCGGTA > 2:96880/1‑101 GATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGCGGTAA < 2:1508667/101‑1 GATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGCGGTAA > 1:587170/1‑101 AATCGTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2116392‑2116282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcctggctgATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGCGGTAA > NC_000913/4192345‑4192444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |