New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2116282 =292 (0.980)3 (0.010) 3/178 44.3 1.1% coding (147/1281 nt) wcaK colanic acid biosynthesis protein
?NC_000913 4192345 = 275 (1.040)coding (1778/1896 nt) thiC thiamin (pyrimidine moiety) biosynthesis protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 299 total aligned reads displayed.

AGGTAGATTTCTCCGCCTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGCGGTAA  >  NC_000913/4192246‑4192444
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aGGTAGATTTCTCCGCCTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGAt                                                                                                    <  2:2245744/101‑1 (MQ=255)
aGGTAGATTTCTCCGCCTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGCAATCACGCACTTCCTGGCTGAt                                                                                                    >  1:2082085/1‑101 (MQ=255)
 ggTAGATTTCTCCGCCTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGAtt                                                                                                   >  1:4069753/1‑101 (MQ=255)
   gaGATTTCTCCGCCTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGAtttt                                                                                                 <  2:487458/100‑1 (MQ=255)
    aGATTTCTCCGCCTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTc                                                                                                >  1:2193719/1‑101 (MQ=255)
     gATTTCTCCGCCTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCa                                                                                               >  1:895294/1‑101 (MQ=255)
          ctcCGCCTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAg                                                                                          <  1:6225606/101‑1 (MQ=255)
          ctcCGCCTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAg                                                                                          <  1:3128485/101‑1 (MQ=255)
          ctcCGCCTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAg                                                                                          <  1:2484898/101‑1 (MQ=255)
              gCCTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGa                                                                                      <  2:1195820/101‑1 (MQ=255)
              gCCTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGa                                                                                      <  1:4595247/101‑1 (MQ=255)
               ccTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGaa                                                                                     >  1:1054824/1‑101 (MQ=255)
                ctctGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAAt                                                                                    <  1:5465856/101‑1 (MQ=255)
                ctctGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAAt                                                                                    <  1:5961433/101‑1 (MQ=255)
                    ggCACGGAAGTTCTCCGACATATCCGCCTTTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCGTCTAGCAGAAtttgg                                                                                >  2:469647/1‑99 (MQ=255)
                    ggCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTTATCGAGCAGAATTTCg                                                                                >  2:3130022/1‑101 (MQ=255)
                       aCGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGcc                                                                             >  2:1534062/1‑101 (MQ=255)
                       aCGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGcc                                                                             >  2:3829825/1‑101 (MQ=255)
                        cGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGccc                                                                            <  1:745631/101‑1 (MQ=255)
                         ggAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCGCGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCca                                                                           <  2:3675999/101‑1 (MQ=255)
                         ggAAGTGCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCca                                                                           >  2:1972313/1‑101 (MQ=255)
                          naaGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCcac                                                                          <  2:5562980/100‑1 (MQ=255)
                          gAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGATTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCcac                                                                          >  2:5188668/1‑101 (MQ=255)
                           aaGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCcaca                                                                         >  2:2906780/1‑101 (MQ=255)
                            aGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCcacac                                                                        >  1:3747465/1‑101 (MQ=255)
                              ttCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACAt                                                                      <  1:4431789/101‑1 (MQ=255)
                              ttCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACAt                                                                      >  2:6330677/1‑101 (MQ=255)
                              ttCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACAt                                                                      <  1:2756671/101‑1 (MQ=255)
                               tctcCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATg                                                                     >  1:5724084/1‑101 (MQ=255)
                               tctcCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATg                                                                     <  1:5177636/101‑1 (MQ=255)
                                ctcCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATgg                                                                    <  1:3356457/101‑1 (MQ=255)
                                cccccaCATTTCCCCCATTGCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCCCTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATgg                                                                    <  2:4124468/96‑1 (MQ=255)
                                   cGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGc                                                                 >  2:1734832/1‑101 (MQ=255)
                                    gACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCa                                                                >  2:817804/1‑101 (MQ=255)
                                    gACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCa                                                                >  1:6153278/1‑101 (MQ=255)
                                    gACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCa                                                                >  1:5373736/1‑101 (MQ=255)
                                        tatCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCaaaaa                                                            >  1:255409/1‑101 (MQ=255)
                                        tatCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCaaaaa                                                            <  1:6062645/101‑1 (MQ=255)
                                         atCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAAt                                                           <  2:2422353/101‑1 (MQ=255)
                                         atCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAAt                                                           >  2:3559725/1‑101 (MQ=255)
                                           ccGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATgg                                                         >  2:2585547/1‑101 (MQ=255)
                                           ccGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATgg                                                         >  1:3423836/1‑101 (MQ=255)
                                            cGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATggg                                                        <  2:624100/101‑1 (MQ=255)
                                             gCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGc                                                       <  1:6379794/101‑1 (MQ=255)
                                                aTTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGAc                                                    <  1:1793933/101‑1 (MQ=255)
                                                 ttCCCATTTCAATAGTTTGCGTGGCTGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACt                                                   <  2:5094541/101‑1 (MQ=255)
                                                 ttCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACt                                                   <  2:3747095/101‑1 (MQ=255)
                                                  tCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACtt                                                  <  1:4154109/101‑1 (MQ=255)
                                                   cccATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACttt                                                 <  1:4944181/101‑1 (MQ=255)
                                                       tttCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCt                                             <  1:4260064/101‑1 (MQ=255)
                                                       tttCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCt                                             <  2:6603433/101‑1 (MQ=255)
                                                       tttCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCt                                             >  1:1509337/1‑101 (MQ=255)
                                                        ttCAATAGTTTGCGTGGCGGCGTCCTCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTg                                            <  2:2162265/101‑1 (MQ=255)
                                                        ttCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTg                                            <  1:6602514/101‑1 (MQ=255)
                                                        ttCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTg                                            <  2:1880827/101‑1 (MQ=255)
                                                        ttCAATAGTTTGCGTGGCGGCATAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTg                                            <  2:2522108/101‑1 (MQ=255)
                                                          cAATAGTTTGCGTGGCGGCGTAATCACGCACGGCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGAc                                          >  2:4524110/1‑101 (MQ=255)
                                                             tAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGActct                                       <  1:6914116/101‑1 (MQ=255)
                                                              aGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCtt                                      <  2:4632215/101‑1 (MQ=255)
                                                               gTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTg                                     <  1:1365594/101‑1 (MQ=255)
                                                               gTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTg                                     <  1:5558613/101‑1 (MQ=255)
                                                                tttGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGc                                    <  2:6199104/101‑1 (MQ=255)
                                                                 ttGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCg                                   >  1:3532332/1‑101 (MQ=255)
                                                                  tGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCgg                                  <  1:1037608/101‑1 (MQ=255)
                                                                    cGTGGGGGGGGAATCACGCACTTCCTGGCTGATTTTGATCGGGGAGAATTTCGGTCCACACATGGAGCAAAAATGGGCGACTTTACCCTGCTCTTGCGGCa                                >  2:1332723/1‑101 (MQ=255)
                                                                     gTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAg                               >  2:1590704/1‑101 (MQ=255)
                                                                     gTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTCcagcag                               >  2:2809115/1‑101 (MQ=255)
                                                                     gTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTCCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAg                               >  2:6120197/1‑101 (MQ=255)
                                                                      tGGCGTCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAgg                              >  2:2025732/1‑101 (MQ=255)
                                                                         cggcgTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAggtac                           <  2:6527343/101‑4 (MQ=255)
                                                                         aggcgTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAATTGGGCGACTTTACCTGACTCTTGCGGCAGGGtt                           <  2:1072253/100‑1 (MQ=255)
                                                                          ggcgTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGttt                          <  2:2657190/101‑1 (MQ=255)
                                                                          ggcgTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGttt                          >  1:1459189/1‑101 (MQ=255)
                                                                             gTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCAt                       <  2:1459189/101‑1 (MQ=255)
                                                                             gTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGGTTCAt                       >  1:1539665/1‑101 (MQ=255)
                                                                              tAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGGGGCAGGGTTTCATc                      <  1:1139977/101‑1 (MQ=255)
                                                                              tAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATc                      <  2:5296874/101‑1 (MQ=255)
                                                                              tAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATc                      >  2:6948980/1‑101 (MQ=255)
                                                                              tAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATc                      <  1:5782734/101‑1 (MQ=255)
                                                                                aTCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGt                    >  2:512480/1‑101 (MQ=255)
                                                                                 tCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCCCACATCGCGCAACAACGGCCGACTTTACCTGACTCTCGCGCCACGGTTTAATCGTg                   <  2:6827612/101‑1 (MQ=255)
                                                                                   aCGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGAt                 <  1:2987662/101‑1 (MQ=255)
                                                                                    cGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGCCTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATa                <  2:642636/101‑1 (MQ=255)
                                                                                    cGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATa                <  1:2380973/101‑1 (MQ=255)
                                                                                    cGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATa                <  2:3393373/101‑1 (MQ=255)
                                                                                    cGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATa                <  1:3239462/101‑1 (MQ=255)
                                                                                    cGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATa                <  1:3048542/101‑1 (MQ=255)
                                                                                      cACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAg              >  1:2043791/1‑101 (MQ=255)
                                                                                      cACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAg              <  1:5123766/101‑1 (MQ=255)
                                                                                      cACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAg              <  1:3667332/101‑1 (MQ=255)
                                                                                       aCTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGAATCTTGCGGCAGGGTTTCATCGTGATAAgc             <  2:3428005/101‑1 (MQ=255)
                                                                                        cTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGTCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAgcg            <  2:5861522/101‑1 (MQ=255)
                                                                                          tCCTGGCTGATTTTCATCGAGGAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGCTTCATCGTGATAAGcgcg          >  1:4685359/1‑101 (MQ=255)
                                                                                            cTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCgcggg        <  2:5951544/101‑1 (MQ=255)
                                                                                             tGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCgcgggc       <  2:4268227/101‑1 (MQ=255)
                                                                                             tGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCgcgggc       >  1:529259/1‑101 (MQ=255)
                                                                                              ggCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGGTTCATCGTGATAAGCgcgggcg      >  1:4375768/1‑101 (MQ=255)
                                                                                               gCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCgcgggcgg     >  1:1634030/1‑101 (MQ=255)
                                                                                                 tGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCgcgggcggga   >  2:4352559/1‑99 (MQ=255)
                                                                                                  gATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGCGGTaa  >  1:587170/1‑101 (MQ=255)
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AGGTAGATTTCTCCGCCTCTGGCACGGAAGTTCTCCGACATATCCGCCATTCCCATTTCAATAGTTTGCGTGGCGGCGTAATCACGCACTTCCTGGCTGATTTTCATCGAGCAGAATTTCGGCCCACACATGGAGCAAAAATGGGCGACTTTACCTGACTCTTGCGGCAGGGTTTCATCGTGATAAGCGCGGGCGGTAA  >  NC_000913/4192246‑4192444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.