| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3235543 = | 28 (0.900) | 4 (0.140) | 4/252 | 3.5 | 13.0% | coding (333/1137 nt) | rlmG | 23S rRNA m(2)G1835 methyltransferase, SAM‑dependent |
| ? | NC_000913 | 3235583 = | 27 (0.920) | coding (293/1137 nt) | rlmG | 23S rRNA m(2)G1835 methyltransferase, SAM‑dependent | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAGCACCGCCGACTACCCGCAACAGCCGGGTGTGGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3235582‑3235543‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgctgTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTATGTTCCGCCAGTGCGCAGCTTAACGCACCAAAGGCATCATTCAGGATC > NC_000913/3235583‑3235729 CAGCACCGCCGACTACCCGCAACAGCCGGGTGTGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAG > 7:7469/1‑78CAGCACCGCCGACTACCCGCAACAGCCGGGTGTGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAG < 8:7469/78‑1 CACCGCCGACTACCCGCAACAGCCGGGTGTGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTATGTTCCGC < 7:105385/144‑1 CACCGCCGACTACCCGCAACAGCCGGGTGTGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTATGTTCCGC > 8:105385/1‑144 GTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTATGTTCCGCCAGTGCGCAGCTTAACGCACCAAAGGCATCATTCAGGATC > 4:8579/1‑148 CAGCACCGCCGACTACCCGCAACAGCCGGGTGTGGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3235582‑3235543‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgctgTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTATGTTCCGCCAGTGCGCAGCTTAACGCACCAAAGGCATCATTCAGGATC > NC_000913/3235583‑3235729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |