| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3235543 = | 28 (0.900) | 4 (0.140) | 4/252 | 3.5 | 13.0% | coding (333/1137 nt) | rlmG | 23S rRNA m(2)G1835 methyltransferase, SAM‑dependent |
| ? | NC_000913 | 3235583 = | 27 (0.920) | coding (293/1137 nt) | rlmG | 23S rRNA m(2)G1835 methyltransferase, SAM‑dependent | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGGCAATAATACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTATGTTCCGCCAGTGCGCAGCTTAACGCACCAAAGGCATCATTCAGGATC > NC_000913/3235455‑3235729 | cGGCAATAGTACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGAc > 1:62652/1‑149 (MQ=255) gtgtATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAAc > 6:13039/1‑125 (MQ=255) gtgtATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAAc < 5:13039/125‑1 (MQ=255) gtATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGtt > 2:27613/1‑149 (MQ=255) gtATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGtt > 5:119748/1‑149 (MQ=255) tCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAg < 7:32394/149‑1 (MQ=255) cGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATc > 3:3274/1‑139 (MQ=255) cGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATc < 4:3274/139‑1 (MQ=255) cGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGc > 7:99479/1‑149 (MQ=255) gACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCTGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATccc < 1:26432/135‑1 (MQ=255) gACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCTGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATccc > 2:26432/1‑135 (MQ=255) aCTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATtctc < 1:27613/149‑1 (MQ=255) aCTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATtctc < 8:99479/149‑1 (MQ=255) cTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTcg > 3:82040/1‑149 (MQ=255) gcagcgcaCGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGTGGCGTAAATTCTCGCGCGTc < 2:62652/149‑1 (MQ=255) gCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGGCGCCAGTTCACTGAt < 4:82040/148‑1 (MQ=255) cAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCga > 7:77504/1‑65 (MQ=255) cAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCga < 8:77504/65‑1 (MQ=255) cAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACtcat > 2:39648/1‑86 (MQ=255) gCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTa < 6:119748/149‑1 (MQ=255) acacCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTAt > 7:101685/1‑108 (MQ=255) acacCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTAt > 7:103363/1‑108 (MQ=255) acacCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTAt < 8:101685/108‑1 (MQ=255) acacCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTAt < 8:103363/108‑1 (MQ=255) ccGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGCCTCATCAATCCCGTTGAGGCGTAACTTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTATGTTCCGCCAGTGCGCAGCt > 7:117901/1‑148 (MQ=255) ccGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTa > 7:22186/1‑128 (MQ=255) ccGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTa < 8:22186/128‑1 (MQ=255) gTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTATGTTCCGCCAGTGCGCAGCTTAACGCACCAAAGGCATCATTCAGGATc > 4:8579/1‑148 (MQ=255) | CGGCAATAATACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTATGTTCCGCCAGTGCGCAGCTTAACGCACCAAAGGCATCATTCAGGATC > NC_000913/3235455‑3235729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |