Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 1,335,153 Δ593 bp 100% [ymiA]–yciX [ymiA], yciX

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1335153 1335745 593 120 [1] [0] 119 [ymiA]–yciX [ymiA],yciX

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 13351521 (0.010)107 (1.160) 84/260 NT 99.5% coding (29/165 nt) ymiA uncharacterized protein
?NC_000913 1335746 = 0 (0.000)intergenic (+288/‑85) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A

Only 100 of 119 total aligned reads displayed.

CCTGGATGGGCGCGTTTTCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCAC  >  NC_000913/1335600‑1335893
                                                                                                                                                  |                                                                                                                                                   
caggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagaa                                                                                                                                                    <  2:189222‑M2/2‑1 (MQ=255)
 aggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattaaatgagAAAt                                                                                                                                                  <  2:385594‑M2/4‑1 (MQ=255)
  ggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATc                                                                                                                                                 <  5:316743‑M2/5‑1 (MQ=255)
  ggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATc                                                                                                                                                 <  4:303018‑M2/5‑1 (MQ=255)
    tcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGt                                                                                                                                               <  3:150851‑M2/7‑1 (MQ=255)
      aaaagattgaattattcactggagacgattcgtaaattctctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatagttcaacgtctagctgataagtgatggcgattatattagAAATCTTTa                                                                                                                                             >  6:109353‑M2/141‑149 (MQ=255)
       aaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTAc                                                                                                                                            >  4:28841‑M2/140‑149 (MQ=255)
       aaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTAc                                                                                                                                            >  3:226593‑M2/140‑149 (MQ=255)
          gattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttatttaggatttgtctcatcgtatcattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTAcgc                                                                                                                                          >  8:339036‑M2/137‑148 (MQ=255)
            ttgaattattcactggatacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGAt                                                                                                                                       <  5:376743‑M2/15‑1 (MQ=255)
             tgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATg                                                                                                                                      >  8:135367‑M2/134‑149 (MQ=255)
               aattattcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTAcgc                                                                                                                                          <  5:249430‑M2/12‑1 (MQ=255)
                attattcactggagacgattcttaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGttt                                                                                                                                   <  1:354513‑M2/19‑1 (MQ=255)
                attattcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGttt                                                                                                                                   <  3:28841‑M2/19‑1 (MQ=255)
                   attcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTtgtg                                                                                                                                >  1:208936‑M2/128‑149 (MQ=255)
                   attcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTtgt                                                                                                                                 <  7:386875‑M2/21‑1 (MQ=255)
                       actggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTAt                                                                                                                            <  1:167355‑M2/26‑1 (MQ=255)
                       actggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTAt                                                                                                                            >  6:302168‑M2/124‑149 (MQ=255)
                       actggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTAt                                                                                                                            <  6:321121‑M2/26‑1 (MQ=255)
                           gagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCtt                                                                                                                         >  3:204672‑M2/120‑148 (MQ=255)
                            agacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCttt                                                                                                                        >  1:219583‑M2/119‑148 (MQ=255)
                                          ttcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtctttctgataagtgatggagattatatgagAAATCGTTACGCTATGTTTGTGTTATCTTTAATATTCACCCTGaa                                                                                                         <  5:109353‑M2/45‑1 (MQ=255)
                                             gctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGaa                                                                                                         >  3:40852‑M2/102‑146 (MQ=255)
                                               tggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGaa                                                                                                    >  4:258249‑M2/100‑149 (MQ=255)
                                                 gatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAAt                                                                                                   >  8:360538‑M2/98‑148 (MQ=255)
                                                 gatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAAt                                                                                                   <  7:126668‑M2/51‑1 (MQ=255)
                                                   tttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAg                                                                                                <  4:206662‑M2/54‑1 (MQ=255)
                                                      ttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGc                                                                                             >  1:213648‑M2/93‑149 (MQ=255)
                                                          ctaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCg                                                                                         >  2:349555‑M2/89‑149 (MQ=255)
                                                           taaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAaga                                                                                                       <  6:26297‑M2/47‑1 (MQ=255)
                                                           taaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAaga                                                                                                       >  5:26297‑M2/88‑134 (MQ=255)
                                                                tttattttggttttgtctgatcgtatgattaattaaaccaatcgttcaaagtcttgctgttaagtgattgcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAccc                                                                                   <  4:204672‑M2/67‑1 (MQ=255)
                                                                     ttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAg                                                                                                >  3:52716‑M2/78‑131 (MQ=255)
                                                                     ttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAg                                                                                                <  4:52716‑M2/54‑1 (MQ=255)
                                                                     ttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCa                                                                              >  6:93245‑M2/78‑149 (MQ=255)
                                                                      taggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTc                                                                               <  4:40852‑M2/71‑1 (MQ=255)
                                                                      taggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCa                                                                              <  4:226593‑M2/72‑1 (MQ=255)
                                                                         gatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCAtt                                                                            >  4:154278‑M2/74‑147 (MQ=255)
                                                                         gatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAACAGAATCAGGGCTTCGCAACCCTGTCATTaa                                                                          <  2:208936‑M2/76‑1 (MQ=255)
                                                                          atttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag                                                                         <  1:369009‑M2/77‑1 (MQ=255)
                                                                          atttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag                                                                         <  2:213648‑M2/77‑1 (MQ=255)
                                                                          atttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag                                                                         <  6:165745‑M2/77‑1 (MQ=255)
                                                                             tgtctcatcgtctgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgcgAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGCGAATCAGGGCTTCGCAACCCTGTCATTAagga                                                                       <  6:760‑M2/79‑1 (MQ=255)
                                                                              gtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggag                                                                      <  2:369187‑M2/80‑1 (MQ=255)
                                                                               tctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAcc                                                                                    <  3:334595‑M2/66‑1 (MQ=255)
                                                                               tctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAcc                                                                                    >  4:334595‑M2/68‑133 (MQ=255)
                                                                               tctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggag                                                                      >  7:138803‑M2/68‑147 (MQ=255)
                                                                                 tcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAggagga                                                                    <  4:54309‑M2/82‑1 (MQ=255)
                                                                                   atcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGaa                                                                                                         >  1:256237‑M2/64‑108 (MQ=255)
                                                                                   atcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGaa                                                                                                         <  2:256237‑M2/45‑1 (MQ=255)
                                                                                   atcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGc                                                                  <  5:93245‑M2/84‑1 (MQ=255)
                                                                                   atcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCt                                                                 <  5:65836‑M2/85‑1 (MQ=255)
                                                                                   atcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTa                                                                >  3:48961‑M2/64‑149 (MQ=255)
                                                                                   atcgaatgattaataacaacaatcgttcaacttcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTAGCAACCCTGTCATTAAGgaggag                                                                   <  6:303537‑M2/83‑1 (MQ=255)
                                                                                      gtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTAt                                                               >  6:26976‑M2/61‑147 (MQ=255)
                                                                                      gtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTAt                                                               <  5:26976‑M2/87‑1 (MQ=255)
                                                                                      gtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACACTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgt                                                             >  6:158930‑M2/61‑149 (MQ=255)
                                                                                         tgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgt                                                          >  4:85489‑M2/58‑149 (MQ=255)
                                                                                         tgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgt                                                          <  5:302168‑M2/92‑1 (MQ=255)
                                                                                            ttaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCaa                                                       <  4:50711‑M2/95‑1 (MQ=255)
                                                                                            ttaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCaa                                                       <  4:88348‑M2/95‑1 (MQ=255)
                                                                                                ttacaccaatcgttcaagttcttgctgattagtgattgcgattatatgagAAATCGTTACGCGATGTTTGTGTTTTCTTTAATATTCACCCTGATGAGAATCTGGGCTTCGCATCCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCt                                                   <  8:326065‑M2/99‑1 (MQ=255)
                                                                                                   caccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTAc                                                 <  1:289641‑M2/101‑1 (MQ=255)
                                                                                                    accaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACga                                               <  7:135367‑M2/103‑1 (MQ=255)
                                                                                                       aatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACgag                                              >  1:210381‑M2/44‑147 (MQ=255)
                                                                                                       aatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGaa                                            <  3:258249‑M2/106‑1 (MQ=255)
                                                                                                         tcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGc                                          <  8:393030‑M2/108‑1 (MQ=255)
                                                                                                           gttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCa                                        <  7:125142‑M2/110‑1 (MQ=255)
                                                                                                           gttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCa                                        <  4:168011‑M2/110‑1 (MQ=255)
                                                                                                            ttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAg                                       >  5:21837‑M2/39‑149 (MQ=255)
                                                                                                            ttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAg                                       >  2:43817‑M2/39‑149 (MQ=255)
                                                                                                              caacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGt                                      <  7:436215‑M2/112‑1 (MQ=255)
                                                                                                               aacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGt                                      >  6:151655‑M2/36‑147 (MQ=255)
                                                                                                               aacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGt                                      >  7:394484‑M2/36‑147 (MQ=255)
                                                                                                               aacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTaa                                    <  6:21837‑M2/114‑1 (MQ=255)
                                                                                                               aacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTaa                                    <  5:158930‑M2/114‑1 (MQ=255)
                                                                                                               aacgtcttgctgataagtgatgccgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTa                                     <  2:224942‑M2/113‑1 (MQ=255)
                                                                                                                acgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                   <  7:360538‑M2/115‑1 (MQ=255)
                                                                                                                   tcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTAt                                                                                                                            <  4:369380‑M2/26‑1 (MQ=255)
                                                                                                                   tcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTAt                                                                                                                            >  3:369380‑M2/32‑57 (MQ=255)
                                                                                                                     ttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCAtt                                                                            <  8:189691‑M2/74‑1 (MQ=255)
                                                                                                                     ttgccgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGac                                >  8:336666‑M2/30‑147 (MQ=255)
                                                                                                                     ttgccgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGac                                <  7:336666‑M2/118‑1 (MQ=255)
                                                                                                                       gctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGt                                                                                >  4:337027‑M2/28‑97 (MQ=255)
                                                                                                                        ctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTCATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGtt                           >  2:160494‑M2/27‑149 (MQ=255)
                                                                                                                           ataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCa                        <  2:210381‑M2/126‑1 (MQ=255)
                                                                                                                              agtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAgg                      <  3:154278‑M2/128‑1 (MQ=255)
                                                                                                                              agtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGc                     <  5:151655‑M2/129‑1 (MQ=255)
                                                                                                                              agtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGc                     <  3:85489‑M2/129‑1 (MQ=255)
                                                                                                                               gtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGc                     >  2:236000‑M2/20‑148 (MQ=255)
                                                                                                                                     gcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGa               <  1:349555‑M2/135‑1 (MQ=255)
                                                                                                                                       gtttatatgagTAATCGTTACGGGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGTATCAGGGCTTCGCAACACTGTCATTAAGGAGGAGCTATGTCGTCTACCCTACGAGAAGCCAGTAAGTACACGTTGCAGGCCAAAGATaa            <  2:284747‑M2/138‑1 (MQ=255)
                                                                                                                                           atatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagg                                                                        <  8:418831‑M2/78‑1 (MQ=255)
                                                                                                                                            tatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGt                                      >  2:269017‑M2/7‑118 (MQ=255)
                                                                                                                                              tgagAAATCGTTACGCGATTTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAc     <  7:339036‑M2/145‑1 (MQ=255)
                                                                                                                                              tgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGacac                              >  3:366155‑M2/5‑124 (MQ=255)
                                                                                                                                              tgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAc     >  6:188221‑M2/5‑149 (MQ=255)
                                                                                                                                                agAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAcc    <  5:188221‑M2/146‑1 (MQ=255)
                                                                                                                                                 gAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCAc  <  1:43817‑M2/148‑1 (MQ=255)
                                                                                                                                                  aaaTCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCac  >  7:345309/1‑148 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
CCTGGATGGGCGCGTTTTCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCAC  >  NC_000913/1335600‑1335893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑