New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 88827424 (0.720)8 (0.250) 8/250 2.4 25.4% coding (1546/1686 nt) ybjL putative transporter
?NC_000913 = 888284 24 (0.750)coding (1536/1686 nt) ybjL putative transporter

ATACCATGACGATGATTGTCCCTGCCAGCGTCAGCAGGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTGACAATCAATCCGGCAATCAACATCTGACCGCCAATCGCGCCCAGGCCGTTA  >  NC_000913/888151‑888425
                                                                                                                                     |                                                                                                                                             
aTACCATGACGATGATTGTCCCTGCCAGCGTCAGCAGGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTgc                                                                                                                                 <  1:112192/148‑1 (MQ=255)
aTACCATGACGATGATTGTCCCTGCCAGCGTCAGCAGGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTgc                                                                                                                                 >  2:112192/1‑148 (MQ=255)
    cATGACGATGATTGTCCCTGCCAGCGTCAGCAGGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCg                                                                                                                             >  7:137978/1‑148 (MQ=255)
          gatgatTGTCCCTGCCAGCGTCAGCAGGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAacaaca                                                                                                                      <  8:137978/149‑1 (MQ=255)
                     cTGCCAGCGTCAGCAGGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTc                                                                                                           <  3:21017/149‑1 (MQ=255)
                        ccAGCGTCAGCAGGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCAtt                                                                                                        <  6:92760/149‑1 (MQ=255)
                         cAGCGTCAGCAGGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTc                                                                                                       <  5:40800/149‑1 (MQ=255)
                                agcagGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTc                                                                                                       <  6:41792/142‑1 (MQ=255)
                                agcagGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTc                                                                                                       >  5:41792/1‑142 (MQ=255)
                                 gcagGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACa                                                                                               >  2:66752/1‑149 (MQ=255)
                                  cagGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACa                                                                                               >  6:49390/1‑148 (MQ=255)
                                       cGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCa                                                                                         <  1:138568/149‑1 (MQ=255)
                                            gCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTc                                                                                                           >  1:8020/1‑126 (MQ=255)
                                            gCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTc                                                                                                           <  2:8020/126‑1 (MQ=255)
                                                       ggTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGa                                                                         <  1:66752/149‑1 (MQ=255)
                                                           cccGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAAc                                                                     >  6:57460/1‑149 (MQ=255)
                                                                aTAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACgg                                                                <  5:57460/149‑1 (MQ=255)
                                                                                 tGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCAc                                                            >  5:42840/1‑136 (MQ=255)
                                                                                 tGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCAc                                                            <  6:42840/136‑1 (MQ=255)
                                                                                   ttACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTgcgccggcaatggagatcatcagtgatacagctcgcagtaacatcccggcgctgggctatgcgggcacctatgcaatcgccaacg                                                          <  1:64106‑M2/136‑86 (MQ=255)
                                                                                   ttACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTgcgccggcaatggagatcatcagtgatacagctcgcagtaacatcccggcgctgggctatgcgggcacctatgcaatcgccaacg                                                          >  2:64106‑M2/1‑51 (MQ=255)
                                                                                      cTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTGACAATCAATcc                                          >  1:56729/1‑149 (MQ=255)
                                                                                                                 aTTGCCGGCGCGCAGGTACGTgcgccggcaatggagatcatcagtgata                                                                                                                   <  8:109066‑M2/49‑29 (MQ=255)
                                                                                                                 aTTGCCGGCGCGCAGGTACGTgcgccggcaatggagatcatcagtgata                                                                                                                   >  7:109066‑M2/1‑21 (MQ=255)
                                                                                                                     ccGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTGACAATCAATCCGGCAATCAACATCTGACCGCCAATCGCGcc            <  5:49390/148‑1 (MQ=255)
                                                                                                                      cGGCGCGCAGGTACGTgcgccggcaatggagatcatcagtgatacagctcgcagtaacatcccggcgctgggctatgcgggcacctatgcaatcgccaacgtcctgc                                                    >  2:158251‑M2/1‑16 (MQ=255)
                                                                                                                      cGGCGCGCAGGTACGTgcgccggcaatggagatcatcagtgatacagctcgcagtaacatcccggcgctgggctatgcgggcacctatgcaatcgccaacgtcctgc                                                    <  1:158251‑M2/107‑92 (MQ=255)
                                                                                                                          gcgcAGGTACGTgcgccggcaatggagatcatcagtgatacagctcgcagtaacatcccggcgctgggctatgcgggcacctat                                                                       >  1:167930‑M2/1‑12 (MQ=255)
                                                                                                                          gcgcAGGTACGTgcgccggcaatggagatcatcagtgatacagctcgcagtaacatcccggcgctgggctatgcgggcacctat                                                                       <  2:167930‑M2/84‑73 (MQ=255)
                                                                                                                              aGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAAAACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTGACAATCAATCCGGCAATCAACATCTGACCGCCAATCGCGCCCAGGCCGtta  >  4:10269/1‑149 (MQ=255)
                                                                                                                                gTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTGACAATCAATCCGGCAATCAACATCTGACCGCCAATCGCGCCCAGGCCGt    >  7:106866/1‑145 (MQ=255)
                                                                                                                                gTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTGACAATCAATCCGGCAATCAACATCTGACCGCCAATCGCGCCCAGGCCGt    <  8:106866/145‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                             
ATACCATGACGATGATTGTCCCTGCCAGCGTCAGCAGGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTGACAATCAATCCGGCAATCAACATCTGACCGCCAATCGCGCCCAGGCCGTTA  >  NC_000913/888151‑888425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.