mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4583124 | 105 (1.330) | 4 (0.050) | 4/246 | NT | 4.3% | intergenic (‑76/+125) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme |
| ? | NC_000913 | = 4583237 | 78 (1.040) | intergenic (‑189/+12) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | 4184160 = | 75 (0.950) | 3 (0.040) | 3/252 | NT | 3.9% | coding (2916/4029 nt) | rpoB | RNA polymerase, beta subunit |
| ? | NC_000913 | 4184177 = | 75 (0.980) | coding (2933/4029 nt) | rpoB | RNA polymerase, beta subunit | |||||
| * | ? | NC_000913 | = 3771418 | 116 (1.470) | 3 (0.040) | 3/252 | NT | 2.7% | coding (327/363 nt) | yibI | DUF3302 family inner membrane protein |
| ? | NC_000913 | = 3771445 | 103 (1.340) | coding (300/363 nt) | yibI | DUF3302 family inner membrane protein | |||||
| * | ? | NC_000913 | = 3750797 | 89 (1.130) | 3 (0.040) | 3/244 | NT | 3.4% | intergenic (+16/+16) | sgbE/ysaC | L‑ribulose‑5‑phosphate 4‑epimerase/pseudogene |
| ? | NC_000913 | = 3750803 | 89 (1.200) | intergenic (+22/+10) | sgbE/ysaC | L‑ribulose‑5‑phosphate 4‑epimerase/pseudogene | |||||
| * | ? | NC_000913 | 3342725 = | 106 (1.340) | 4 (0.050) | 4/250 | NT | 3.8% | coding (453/567 nt) | kdsC | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase |
| ? | NC_000913 | 3342747 = | 101 (1.330) | coding (475/567 nt) | kdsC | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase | |||||
| * | ? | NC_000913 | = 283320 | 77 (0.970) | 4 (0.050) | 4/246 | NT | 4.6% | coding (120/1968 nt) | yagF | CP4‑6 prophage; dehydratase family protein |
| ? | NC_000913 | = 283357 | 93 (1.240) | coding (157/1968 nt) | yagF | CP4‑6 prophage; dehydratase family protein | |||||
| * | ? | NC_000913 | 193444 = | 90 (1.140) | 3 (0.040) | 3/240 | NT | 3.5% | intergenic (+15/‑77) | frr/dxr | ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase |
| ? | NC_000913 | 193489 = | 82 (1.120) | intergenic (+60/‑32) | frr/dxr | ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase | |||||