New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3158885 =99 (1.120)3 (0.040) 3/252 NT 3.2% intergenic (+1/+42) yqhH/ygiQ outer membrane lipoprotein, Lpp paralog/Radical SAM superfamily protein
?NC_000913 3158930 = 85 (1.010)coding (2217/2220 nt) ygiQ Radical SAM superfamily protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 115 total aligned reads displayed.

CAAAATCGCCCGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCG  >  NC_000913/3158740‑3159033
                                                                                                                                                 |                                                                                                                                                    
ccgcaatacccgtccggcgttgacgaaacatacgccgatggcgacccagcgtcagacgcctgctacggcaaaaaaagcgtcgtctacgcaatctcgtccggtgaatgctggtgcgaagaaacggcctaaagcggcggttggacgtTaa                                                                                                                                                    <  5:65181‑M1/3‑1 (MQ=255)
cAAAATCGCCCGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATaaa                                                                                                                                                   <  3:148125/149‑1 (MQ=255)
cAAAATCGCCCGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATaa                                                                                                                                                    >  7:389918/1‑148 (MQ=255)
 aaaaTCGCCCGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATaaa                                                                                                                                                   >  2:317562/1‑148 (MQ=255)
   aaTCGCCCGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTAAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATaaaaa                                                                                                                                                 >  3:20491/1‑148 (MQ=255)
       gCCCGGCTTCAGCAGGAACTGAAAGCACTACGCCCTCAAATCTATGCTGACAAATCCGAAGCTAACCTAGCCAATAGGCGTCTTGAAGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATc                                                                                                                                             <  6:375944/148‑1 (MQ=255)
        cccGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATccc                                                                                                                                           <  4:94986/149‑1 (MQ=255)
        cccGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATccc                                                                                                                                           <  3:157671/149‑1 (MQ=255)
        cccGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATccc                                                                                                                                           >  7:24908/1‑149 (MQ=255)
           ggCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCgg                                                                                                                                        >  1:112861/1‑149 (MQ=255)
             cTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTa                                                                                                                                      <  6:96933/149‑1 (MQ=255)
                 aGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCgt                                                                                                                                  >  6:65181/1‑149 (MQ=255)
                     ggATATGAAAGCACTACGCCCACAAATCTATGCTGCCAACTCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGACTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCa                                                                                                                              <  6:5873/149‑1 (MQ=255)
                      gATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTTCCTGCGCTGCTTGCGTATGTACTCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAg                                                                                                                             >  6:102566/1‑149 (MQ=255)
                      gATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAg                                                                                                                             >  7:76464/1‑149 (MQ=255)
                       atatGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGt                                                                                                                            >  7:343972/1‑149 (MQ=255)
                         atGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTg                                                                                                                          >  4:160887/1‑149 (MQ=255)
                           gAAAGCCCGACGCCCACAAATCTATGCTGCCACATCCGACGCTAACAGAGCCAATACCCGCCTTGATGCTCAGGACTATTTTGATTGCCTGCGCGGCTGGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGGCAGTTGcc                                                                                                                        <  4:118969/149‑1 (MQ=255)
                             aaGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCg                                                                                                                       <  7:141119/148‑1 (MQ=255)
                               gCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCgggg                                                                                                                    <  8:389918/149‑1 (MQ=255)
                                 aCTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGa                                                                                                                   >  3:195066/1‑148 (MQ=255)
                                 aCTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGa                                                                                                                   >  7:311014/1‑148 (MQ=255)
                                  cTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGata                                                                                                                 >  1:102651/1‑149 (MQ=255)
                                   tACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCGGGGGatat                                                                                                                >  8:200156/1‑149 (MQ=255)
                                   tACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGatat                                                                                                                >  2:166372/1‑149 (MQ=255)
                                      gCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGTGGATAtttt                                                                                                             >  3:10255/1‑149 (MQ=255)
                                      gCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATAtttt                                                                                                             >  2:175678/1‑149 (MQ=255)
                                      gCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGACAtttt                                                                                                             >  3:133454/1‑149 (MQ=255)
                                      gCCCACAAATCTATGCTGCCAAATCCGAAGATAACAGAGCCAATACGCGTCTTGATGCTCAGGAATATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATAtttt                                                                                                             <  2:321450/149‑1 (MQ=255)
                                           caAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCGTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAAc                                                                                                        <  7:75942/149‑1 (MQ=255)
                                           acccagcgtcagacgcctgctacggcaaaaaaagcgtcgtctacgcaatctcgtccggtgaatgctggtgcgaagaaacggcctaaagcggcggttggacgtTAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAAc                                                                                                        >  7:38776‑M1/103‑149 (MQ=255)
                                             aaTCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGt                                                                                                      <  2:112861/149‑1 (MQ=255)
                                                      tgcCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAAc                                                                                                        >  6:93993/1‑138 (MQ=255)
                                                      tgcCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAAc                                                                                                        <  5:93993/138‑1 (MQ=255)
                                                      tgcCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAAccgcc                                                                                             >  4:15977/1‑149 (MQ=255)
                                                      gacgcctgctacggcaaaaaaagcgtcgtctacgcaatctcgtccggtgaatgctggtgcgaagaaacgacctaaagcggcggttggacgtTAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTaa                                                                                                         >  5:392857‑M1/92‑137 (MQ=255)
                                                      gacgcctgctacggcaaaaaaagcgtcgtctacgcaatctcgtccggtgaatgctggtgcgaagaaacgacctaaagcggcggttggacgtTAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTaa                                                                                                         <  6:392857‑M1/46‑1 (MQ=255)
                                                        ccAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACcgccgc                                                                                           >  7:188113/1‑149 (MQ=255)
                                                         cAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCt                                                                                          >  7:337383/1‑149 (MQ=255)
                                                         cAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTAAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTAAGCAGAATTATAAAAAAATCACCGGTAGCGTGACAGTTGCCGGGGATAATTTTTAAAGTCCAAccgcagat                                                                                          >  6:128833/1‑145 (MQ=255)
                                                          aaaTCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCtt                                                                                         >  3:334105/1‑149 (MQ=255)
                                                            aTCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTcc                                                                                                    <  1:9456/136‑1 (MQ=255)
                                                            aTCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTa                                                                                       <  3:14633/149‑1 (MQ=255)
                                                             tCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAg                                                                                      <  4:310272/149‑1 (MQ=255)
                                                             tCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGAT‑AAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAgg                                                                                     >  4:371639/1‑149 (MQ=255)
                                                               cGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAgg                                                                                     <  6:311857/148‑1 (MQ=255)
                                                                  caatAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGt                                                                                 <  4:147358/146‑1 (MQ=255)
                                                                  aGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGt                                                                                 >  2:322024/1‑149 (MQ=255)
                                                                       aCAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTTCCGGGGATATTTTATAACGTCCAACCGCCGCTTTAGGCCGTttctt                                                                            >  8:144078/1‑149 (MQ=255)
                                                                       aCAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTttctt                                                                            <  7:144078/149‑1 (MQ=255)
                                                                       aCAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTttctt                                                                            <  3:219968/149‑1 (MQ=255)
                                                                        cAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTttcttc                                                                           <  8:76464/149‑1 (MQ=255)
                                                                         agagCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCg                                                                          >  4:330991/1‑149 (MQ=255)
                                                                           agCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCa                                                                        >  2:144658/1‑149 (MQ=255)
                                                                                 tACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCa                                                                  <  4:53448/149‑1 (MQ=255)
                                                                                      gTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCAc                                                             <  5:102566/149‑1 (MQ=255)
                                                                                        cTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCg                                                           >  2:75448/1‑149 (MQ=255)
                                                                                          tGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGa                                                         >  4:182772/1‑149 (MQ=255)
                                                                                           gATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCTGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGAc                                                        >  3:228219/1‑149 (MQ=255)
                                                                                            gtGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGc                                                                                    <  5:146073/119‑1 (MQ=255)
                                                                                            aTGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTGTAGGCCGTTTCTTCGCACCAGCATTCACCGGAc                                                        >  5:13521/1‑148 (MQ=255)
                                                                                             tGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACga                                                      <  8:343972/149‑1 (MQ=255)
                                                                                             tGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACga                                                      <  1:166372/149‑1 (MQ=255)
                                                                                                  aGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGTGATTg                                                 >  7:22978/1‑149 (MQ=255)
                                                                                                  aGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTg                                                 >  2:268603/1‑149 (MQ=255)
                                                                                                    gACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCg                                               >  6:162755/1‑149 (MQ=255)
                                                                                                     aCTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGt                                              <  8:188113/149‑1 (MQ=255)
                                                                                                      cTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTa                                             <  1:175678/149‑1 (MQ=255)
                                                                                                       taatttGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCttt                                                                                        <  5:50091/102‑1 (MQ=255)
                                                                                                       tATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAAc                                                                                                 >  4:41025/1‑96 (MQ=255)
                                                                                                       tATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAAc                                                                                                 <  3:41025/96‑1 (MQ=255)
                                                                                                       tATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCttt                                                                                        >  6:50091/1‑105 (MQ=255)
                                                                                                       tATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCg                                               >  3:163748/1‑146 (MQ=255)
                                                                                                       tATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCg                                               >  4:330823/1‑146 (MQ=255)
                                                                                                       tATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCg                                               >  1:146335/1‑146 (MQ=255)
                                                                                                         ttttGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCTACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAgac                                          >  2:370194/1‑149 (MQ=255)
                                                                                                         ttttGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTa                                             <  4:163748/146‑1 (MQ=255)
                                                                                                               ttGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCCCCAGCATTCACCGGACGAGATTGCGTAGACGACGCt                                    >  5:162550/1‑149 (MQ=255)
                                                                                                               ttGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGc                                     <  8:337383/148‑1 (MQ=255)
                                                                                                                  ccTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCATTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAgacga                                        >  2:127528/1‑142 (MQ=255)
                                                                                                                  ccTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCATTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAgacga                                        <  1:127528/142‑1 (MQ=255)
                                                                                                                   cTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCttttt                                >  6:183933/1‑149 (MQ=255)
                                                                                                                     gcgcTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGCAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTGACCGGATGAGATTGCGTAGACGACGCttttttt                              <  4:20491/149‑1 (MQ=255)
                                                                                                                      cgcTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGTGATTGCGTAGACGACGCttttttt                              <  8:22978/148‑1 (MQ=255)
                                                                                                                       gctgctTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGc                            <  3:330823/149‑1 (MQ=255)
                                                                                                                           ctTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTa                        <  1:268603/149‑1 (MQ=255)
                                                                                                                               cGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCa                     <  8:24908/148‑1 (MQ=255)
                                                                                                                               cGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCa                     <  1:75448/148‑1 (MQ=255)
                                                                                                                               cGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAg                    <  4:334105/149‑1 (MQ=255)
                                                                                                                                  aTGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGATGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTa                                             <  3:132603/121‑1 (MQ=255)
                                                                                                                                  aTGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGATGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTa                                             >  4:132603/1‑121 (MQ=255)
                                                                                                                                   tGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGt                <  4:227630/149‑1 (MQ=255)
                                                                                                                                    gTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGACATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGt                <  4:133454/148‑1 (MQ=255)
                                                                                                                                        gCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGAc           >  5:331003/1‑149 (MQ=255)
                                                                                                                                            aaTGATAAAACAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCACCCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATGCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTg       <  7:201381/149‑1 (MQ=255)
                                                                                                                                            aaTGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTg       >  3:370101/1‑149 (MQ=255)
                                                                                                                                             aTGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTgg      >  3:359081/1‑149 (MQ=255)
                                                                                                                                              tGATAAAAAAATCCCGGGTCGCGGGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCCCCCGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTggg     <  5:128833/149‑1 (MQ=255)
                                                                                                                                                aTAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACAAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTc   >  8:339388/1‑149 (MQ=255)
                                                                                                                                                 TAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCg  <  3:142860‑M1/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CAAAATCGCCCGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGATAAAAAAATCCCCGGTAGCGTGTCAGTTGCCGGGGATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGGACGAGATTGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCG  >  NC_000913/3158740‑3159033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.