Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 4,310,417 IS2 (–) +5 bp 100% coding (560‑564/1533 nt) alsA ← D‑allose ABC transporter ATPase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3186096 =NA (NA)101 (1.210) 73/260 NT 100% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 4310417 = 0 (0.000)coding (564/1533 nt) alsA D‑allose ABC transporter ATPase
* ? NC_000913 = 43104210 (0.000)109 (1.320) 84/258 NT 100% coding (560/1533 nt) alsA D‑allose ABC transporter ATPase
?NC_000913 = 4499511 NA (NA)noncoding (1331/1331 nt) IS2 repeat region

Only 100 of 234 total aligned reads displayed.

ATCGTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATC  >  NC_000913/4310273‑4310569
                                                                                                                                                    |                                                                                                                                                    
ttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGa                                                                                                                                                      >  1:252358‑M2/145‑149 (MQ=255)
  ttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGAt                                                                                                                                                     <  8:285132‑M2/6‑1 (MQ=255)
    tCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtgga                                                                                                                                                  <  4:18902‑M1/149‑5 (MQ=255)
       gtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGaaa                                                                                                                                               >  7:339352‑M2/138‑149 (MQ=255)
          tggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACa                                                                                                                                             <  1:318994‑M2/14‑1 (MQ=255)
          gACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtgg                                                                                                                                                   <  7:16260‑M1/142‑4 (MQ=255)
            cacaTCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgccc                                                                                                                                           <  2:255343‑M1/148‑12 (MQ=255)
             tacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATa                                                                                                                                         <  3:138049‑M2/18‑1 (MQ=255)
             acaTCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTATCATCACCGTATAGAGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccc                                                                                                                                          >  8:15569‑M1/1‑136 (MQ=255)
               aTCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCATCTTTACGCAACTGATTCATGAtggatttgccccta                                                                                                                                        >  1:56775‑M1/1‑134 (MQ=255)
               aTCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTAATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCACCTAAGGCGAGATATAGACGATGGCCTTACCCTCTTTACGCAACTGATTCATGAtggattttcccata                                                                                                                                        >  1:284476‑M1/1‑134 (MQ=255)
                   gtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCAc                                                                                                                                   >  2:2296‑M2/126‑149 (MQ=255)
                    ttACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGCCGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttc                                                                                                                                  >  2:370629‑M1/1‑129 (MQ=255)
                    ttACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGGACCCTCGTTCCGCAACTGATTCAGGAtggatttgcccctagatttc                                                                                                                                  >  6:118674‑M1/1‑129 (MQ=255)
                      tgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACctc                                                                                                                                >  7:7206‑M2/123‑149 (MQ=255)
                          tttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTa                                                                                                                            <  3:61537‑M2/31‑1 (MQ=255)
                          tttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTa                                                                                                                            >  7:164276‑M2/119‑149 (MQ=255)
                            tctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTa                                                                                                                            >  4:61537‑M2/117‑147 (MQ=255)
                               ccggtcctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCAcc                                                                                                                                  >  6:223641‑M2/114‑138 (MQ=255)
                                 ggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtga                                                                                                                     <  4:262093‑M2/38‑1 (MQ=255)
                                   ccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtgagt                                                                                                                   <  8:47988‑M2/40‑1 (MQ=255)
                                    cctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATc                                                                                                                                                    <  1:127171‑M2/7‑1 (MQ=255)
                                     aCGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgccccgatatttccagacatctgttatcac                                                                                                                 >  8:328273‑M1/1‑112 (MQ=255)
                                         tgctgcCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCACCTGATTCATGAtggatttgcccctatatttccagacatctg                                                                                                                        <  5:174500‑M1/138‑31 (MQ=255)
                                           ctgcCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCTGCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaac                                                                                                            <  8:224135‑M1/148‑43 (MQ=255)
                                           ctgcCGGCTTTCATCACCCTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtgcatttgcccctatctttccagacatctcttatcacttaa                                                                                                             <  2:122702‑M1/147‑42 (MQ=255)
                                            tgcCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacc                                                                                                           >  2:35960‑M1/1‑105 (MQ=255)
                                            tgcCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacc                                                                                                           >  8:354988‑M1/1‑105 (MQ=255)
                                            atcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGTtgagtgag                                                                                                                >  7:173887‑M2/101‑143 (MQ=255)
                                            atcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGTtgagtgag                                                                                                                <  8:173887‑M2/43‑1 (MQ=255)
                                               cGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgtt                                                                                                                      >  8:249403‑M1/1‑102 (MQ=255)
                                                   atctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCAt                                                                                                   <  8:368061‑M2/56‑1 (MQ=255)
                                                      catcaCCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcc                                                                                                >  3:164802‑M1/1‑95 (MQ=255)
                                                      catcaCCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCCCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagc                                                                                                 <  5:288707‑M1/148‑54 (MQ=255)
                                                             caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgatgat                                                                                         >  6:33107‑M2/84‑149 (MQ=255)
                                                             caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgatgat                                                                                         >  3:7595‑M2/84‑149 (MQ=255)
                                                                taGCGGTCGCAAATCCGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgca                                                                                      <  5:118674‑M1/149‑65 (MQ=255)
                                                                    tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGAt                                                                                                                                          <  3:243961‑M2/17‑1 (MQ=255)
                                                                    tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGAt                                                                                                                                          >  4:243961‑M2/77‑93 (MQ=255)
                                                                    ggTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagata                                                                                  <  7:206474‑M1/149‑69 (MQ=255)
                                                                      gtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtga                                                                                                                     >  2:127931‑M2/75‑112 (MQ=255)
                                                                        gCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattac                                                                                                     <  1:110281‑M1/126‑50 (MQ=255)
                                                                        gCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattac                                                                                                     >  2:110281‑M1/1‑77 (MQ=255)
                                                                         taaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCAc                                                                                                                                   <  8:198243‑M2/24‑1 (MQ=255)
                                                                         taaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCAc                                                                                                                                   >  7:198243‑M2/72‑95 (MQ=255)
                                                                         taaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACttt                                                                                   >  4:9107‑M2/72‑143 (MQ=255)
                                                                         taaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACttt                                                                                   <  3:9107‑M2/72‑1 (MQ=255)
                                                                          aaaTACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccg                                                                            >  3:38309‑M1/1‑75 (MQ=255)
                                                                          aaaTACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccg                                                                            >  3:120297‑M1/1‑75 (MQ=255)
                                                                             tACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgg                                                                         <  1:367272‑M1/149‑78 (MQ=255)
                                                                                ggCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggc                                                                        >  8:164340‑M1/1‑69 (MQ=255)
                                                                                 gCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgc                                                                                       <  5:223336‑M1/131‑64 (MQ=255)
                                                                                 gCGAATTTCCGCCAACTTAAGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtgtatttgcccctatatttccagacacctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgag                                                                     <  5:51573‑M1/149‑82 (MQ=255)
                                                                                     ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGt                                                                 >  1:104688‑M2/60‑149 (MQ=255)
                                                                                     aTTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcga                                                                  >  6:311986‑M1/1‑64 (MQ=255)
                                                                                      aaccaatatcacttaaataagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGtt                                                                >  5:76377‑M2/59‑149 (MQ=255)
                                                                                           gCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacc                                                             >  4:283530‑M1/1‑58 (MQ=255)
                                                                                           gCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacc                                                             >  6:209085‑M1/1‑58 (MQ=255)
                                                                                                cTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgca                                                      <  4:153591‑M1/149‑97 (MQ=255)
                                                                                                 cttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTc                                                     >  1:188909‑M2/48‑149 (MQ=255)
                                                                                                    atttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTa                                                   <  8:339352‑M2/104‑1 (MQ=255)
                                                                                                         agtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATc                                              <  7:301631‑M2/109‑1 (MQ=255)
                                                                                                           tataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggat                                            <  1:35960‑M1/148‑107 (MQ=255)
                                                                                                           tataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgtcatcacttaacgcattacaagcccgctgccgcagattttcccgtggcgagcgataacccagcgcactatgcggat                                            <  1:370629‑M1/148‑107 (MQ=255)
                                                                                                            ataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgc                                          >  7:123606‑M1/1‑41 (MQ=255)
                                                                                                             taGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcc                                         <  8:123606‑M1/149‑110 (MQ=255)
                                                                                                                  ggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTgg                                     <  1:2296‑M2/118‑1 (MQ=255)
                                                                                                                   gttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAg                                                  <  5:343793‑M2/105‑1 (MQ=255)
                                                                                                                   gttgtctggagattcagggcgccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAg                                                  >  6:343793‑M2/30‑134 (MQ=255)
                                                                                                                    tGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtt                                  <  5:209085‑M1/149‑117 (MQ=255)
                                                                                                                      gtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTga                                 <  2:104688‑M2/122‑1 (MQ=255)
                                                                                                                      gCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtta                                 <  2:38086‑M1/148‑118 (MQ=255)
                                                                                                                         tggagattcagggggccagtctaCATGCTCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGCGGAGGTGGGTTCATCCATGATGATGCCTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTga                                 >  4:341870‑M2/24‑145 (MQ=255)
                                                                                                                          tACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatg                            <  7:328273‑M1/149‑123 (MQ=255)
                                                                                                                          ggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgataga                             >  8:31192‑M2/23‑148 (MQ=255)
                                                                                                                           gagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgatagat                            >  4:280287‑M2/22‑148 (MQ=255)
                                                                                                                               attcagggggcagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAAtt                       <  2:60449‑M2/132‑1 (MQ=255)
                                                                                                                                 cagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTc                      <  7:257356‑M2/133‑1 (MQ=255)
                                                                                                                                  agggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGc                    <  3:280287‑M2/135‑1 (MQ=255)
                                                                                                                                   tACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac                     <  8:79547‑M1/147‑130 (MQ=255)
                                                                                                                                   tACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac                     <  7:15569‑M1/147‑130 (MQ=255)
                                                                                                                                    aCGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcc                  >  6:59039‑M1/1‑17 (MQ=255)
                                                                                                                                     gggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCa                  >  7:348522‑M2/12‑148 (MQ=255)
                                                                                                                                     cGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcct                 >  5:366007‑M1/1‑16 (MQ=255)
                                                                                                                                     cGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcct                 <  4:120297‑M1/149‑134 (MQ=255)
                                                                                                                                      gCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctc                <  5:311986‑M1/149‑135 (MQ=255)
                                                                                                                                        ccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACttt              >  3:349757‑M2/9‑149 (MQ=255)
                                                                                                                                        aaCTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctg              >  4:308424‑M1/1‑13 (MQ=255)
                                                                                                                                        aaCTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgaagatattcccgtggcgagcgataacccagagcactatgcggctgccattcgtaataatgctcgaacgcctct               >  6:169166‑M1/1‑13 (MQ=255)
                                                                                                                                         cagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgatagat                            >  4:220533‑M2/8‑134 (MQ=255)
                                                                                                                                         cagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgatagat                            <  3:220533‑M2/127‑1 (MQ=255)
                                                                                                                                           gtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTCGCATCGAGCATCAGCGGTTTGGCAATTTCTAGCAGCTGCTTGTGGCTGATAGATAAATTCGCCACTTtctc           <  1:73648‑M2/144‑1 (MQ=255)
                                                                                                                                             aTTCATGAtggatttgcccctatatttccagacatctgttatcacttaaccctttacaagcccgctgcggcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaa           <  1:166996‑M1/147‑140 (MQ=255)
                                                                                                                                                cATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATc        >  5:330421/1‑147 (MQ=255)
                                                                                                                                                cATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATc        >  7:242117/1‑147 (MQ=255)
                                                                                                                                                 atgatggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttgtaatgct                          <  6:366033‑M1/128‑125 (MQ=255)
                                                                                                                                                 aTGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATc        >  6:261976/1‑146 (MQ=255)
                                                                                                                                                  tGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATc        >  8:265545/1‑145 (MQ=255)
                                                                                                                                                    atggatttgcccctatatttccagacatctgttatcacttaacccattacaatcccgctgccgcatatattcccgttgcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaactcctctgcaaggttctttg  >  3:316458‑M1/1‑1 (MQ=255)
                                                                                                                                                    atggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccggcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaagggtctttg  >  5:24254‑M1/1‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
ATCGTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATC  >  NC_000913/4310273‑4310569

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.