Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 4,310,417 IS2 (–) +5 bp 100% coding (560‑564/1533 nt) alsA ← D‑allose ABC transporter ATPase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3186096 =NA (NA)101 (1.210) 73/260 NT 100% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 4310417 = 0 (0.000)coding (564/1533 nt) alsA D‑allose ABC transporter ATPase
* ? NC_000913 = 43104210 (0.000)109 (1.320) 84/258 NT 100% coding (560/1533 nt) alsA D‑allose ABC transporter ATPase
?NC_000913 = 4499511 NA (NA)noncoding (1331/1331 nt) IS2 repeat region

Only 100 of 227 total aligned reads displayed.

CGATATCGTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATC  >  NC_000913/4310269‑4310563
                                                                                                                                                    |                                                                                                                                                  
cgATATCGTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTc                                                                                                                                                    <  8:295360/149‑1 (MQ=255)
     tCGTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGa                                                                                                                                                <  4:106641/148‑1 (MQ=255)
      ttcctgtgtggtacgccgtctgcgtttctccggccctaagacttcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctac                                                                                                                                                    <  2:108926‑M2/1‑1 (MQ=255)
        tCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtgga                                                                                                                                            <  4:18902‑M1/149‑5 (MQ=255)
         ctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAg                                                                                                                                            <  2:37338‑M2/9‑1 (MQ=255)
              tggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACa                                                                                                                                       <  1:318994‑M2/14‑1 (MQ=255)
              gACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcc                                                                                                                                      >  8:382690‑M1/1‑139 (MQ=255)
              gACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtgg                                                                                                                                             <  7:16260‑M1/142‑4 (MQ=255)
              gACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtgg                                                                                                                                             >  8:16260‑M1/1‑139 (MQ=255)
               acacATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgccc                                                                                                                                     <  4:280234‑M1/149‑12 (MQ=255)
                gtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgacgagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGCAGCAGa                                                                                                                                     >  6:287675‑M2/133‑148 (MQ=255)
                cacaTCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgccc                                                                                                                                     <  2:255343‑M1/148‑12 (MQ=255)
                 acaTCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccc                                                                                                                                    >  2:87118‑M1/1‑136 (MQ=255)
                       gtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCAc                                                                                                                             >  2:2296‑M2/126‑149 (MQ=255)
                          aCTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttcc                                                                                                                           <  3:264384‑M1/148‑22 (MQ=255)
                           gcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATc                                                                                                                                              <  2:5946‑M2/7‑1 (MQ=255)
                              tttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTa                                                                                                                      >  7:164276‑M2/119‑149 (MQ=255)
                              tttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTa                                                                                                                      <  3:61537‑M2/31‑1 (MQ=255)
                                tctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTa                                                                                                                      >  4:61537‑M2/117‑147 (MQ=255)
                                 ctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTAtt                                                                                                                    <  7:32716‑M2/33‑1 (MQ=255)
                                   cTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgt                                                                                                                 >  3:153591‑M1/1‑118 (MQ=255)
                                    tGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgt                                                                                                                 >  8:206474‑M1/1‑117 (MQ=255)
                                     ggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtga                                                                                                               <  4:262093‑M2/38‑1 (MQ=255)
                                       ccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtgagt                                                                                                             <  8:47988‑M2/40‑1 (MQ=255)
                                        cctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATc                                                                                                                                              <  1:127171‑M2/7‑1 (MQ=255)
                                           gctgctGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcact                                                                                                          >  8:318305‑M1/1‑110 (MQ=255)
                                            agacatcaatcatcttttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTgagga                                                                                                        <  1:250591‑M2/45‑1 (MQ=255)
                                             tgctgcCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCACCTGATTCATGAtggatttgcccctatatttccagacatctg                                                                                                                  <  5:174500‑M1/138‑31 (MQ=255)
                                             tgctgcCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagccatgtg                                                                                                                  >  6:174500‑M1/1‑108 (MQ=255)
                                               ctgcCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaa                                                                                                       <  1:87118‑M1/147‑42 (MQ=255)
                                               ctgcCGGCTTTCATCACCCTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtgcatttgcccctatctttccagacatctcttatcacttaa                                                                                                       <  2:122702‑M1/147‑42 (MQ=255)
                                                tgcCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacc                                                                                                     >  8:354988‑M1/1‑105 (MQ=255)
                                                  ccGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccat                                                                                                  >  1:358124‑M1/1‑103 (MQ=255)
                                                    gTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccatta                                                                                                <  7:267697‑M1/149‑49 (MQ=255)
                                                    gTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttc                                                                                                                            >  8:248110‑M1/1‑101 (MQ=255)
                                                     tCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccatta                                                                                                >  1:38086‑M1/1‑100 (MQ=255)
                                                      cTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattaca                                                                                              <  7:382690‑M1/149‑51 (MQ=255)
                                                          catcaCCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCCCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagc                                                                                           <  5:288707‑M1/148‑54 (MQ=255)
                                                            ttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatg                                                                                        <  3:17152‑M2/61‑1 (MQ=255)
                                                                cGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgc                                                                                    >  3:128569‑M1/1‑89 (MQ=255)
                                                                 gTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgcc                                                                                   >  2:367272‑M1/1‑88 (MQ=255)
                                                                 caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtgagtg                                                                                                            >  5:56801‑M2/84‑124 (MQ=255)
                                                                 caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgatgat                                                                                   >  3:7595‑M2/84‑149 (MQ=255)
                                                                 caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgatgat                                                                                   >  8:15272‑M2/84‑149 (MQ=255)
                                                                  tataGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccg                                                                                  >  8:177423‑M1/1‑87 (MQ=255)
                                                                    taGCGGTCGCAAATCCGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgca                                                                                <  5:118674‑M1/149‑65 (MQ=255)
                                                                        tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGAt                                                                                                                                    >  4:243961‑M2/77‑93 (MQ=255)
                                                                        ggTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagata                                                                            <  7:206474‑M1/149‑69 (MQ=255)
                                                                          gtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtga                                                                                                               >  2:127931‑M2/75‑112 (MQ=255)
                                                                          gtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTg                                                                            <  5:8537‑M2/73‑1 (MQ=255)
                                                                            gCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattac                                                                                               <  1:110281‑M1/126‑50 (MQ=255)
                                                                            gCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattac                                                                                               >  2:110281‑M1/1‑77 (MQ=255)
                                                                            gCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcactt                                                                                                         >  3:282455‑M1/1‑77 (MQ=255)
                                                                            gCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcactt                                                                                                         <  4:282455‑M1/116‑40 (MQ=255)
                                                                            ctaaaaactagtattaagactatcccttagttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGCCTTTGGCAt                                                                        >  4:217579‑M2/73‑149 (MQ=255)
                                                                            ctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCAt                                                                        >  8:257356‑M2/73‑149 (MQ=255)
                                                                             taaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCAc                                                                                                                             >  7:198243‑M2/72‑95 (MQ=255)
                                                                             taaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatga                                                                                       <  5:257506‑M2/62‑1 (MQ=255)
                                                                             taaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatga                                                                                       >  6:257506‑M2/72‑133 (MQ=255)
                                                                             taaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACttt                                                                             >  4:9107‑M2/72‑143 (MQ=255)
                                                                             taaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACttt                                                                             <  3:9107‑M2/72‑1 (MQ=255)
                                                                              aaaTACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccg                                                                      >  3:38309‑M1/1‑75 (MQ=255)
                                                                                     gCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgc                                                                                 <  5:223336‑M1/131‑64 (MQ=255)
                                                                                      gtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATc                                                                <  1:370007‑M2/85‑1 (MQ=255)
                                                                                       gtattaagactatcacttatttgagtgatattggttgtctggagattcagggggcagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGc                                                             >  1:60449‑M2/62‑149 (MQ=255)
                                                                                       gAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagc                                                              >  6:130054‑M1/1‑66 (MQ=255)
                                                                                         ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGt                                                           >  1:104688‑M2/60‑149 (MQ=255)
                                                                                               gCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccca                                                     <  2:358124‑M1/149‑92 (MQ=255)
                                                                                               gCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacc                                                       >  6:209085‑M1/1‑58 (MQ=255)
                                                                                                tatcacttatttaagtgatattggttgtctgtagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGa                                                                     <  6:357575‑M2/80‑1 (MQ=255)
                                                                                                    cTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgca                                                <  4:153591‑M1/149‑97 (MQ=255)
                                                                                                    acttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtga                                                                                                               >  8:172247‑M2/49‑86 (MQ=255)
                                                                                                    acttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtga                                                                                                               <  7:172247‑M2/38‑1 (MQ=255)
                                                                                                     cttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTc                                               >  1:188909‑M2/48‑149 (MQ=255)
                                                                                                        atttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTa                                             <  8:339352‑M2/104‑1 (MQ=255)
                                                                                                        atttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTa                                             <  5:33107‑M2/104‑1 (MQ=255)
                                                                                                               tataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatg                                     >  7:79547‑M1/1‑42 (MQ=255)
                                                                                                               tataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatg                                     <  6:329635‑M1/149‑108 (MQ=255)
                                                                                                                ataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgc                                    >  7:123606‑M1/1‑41 (MQ=255)
                                                                                                                      ggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTgg                               <  1:2296‑M2/118‑1 (MQ=255)
                                                                                                                       gttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAg                                            <  5:343793‑M2/105‑1 (MQ=255)
                                                                                                                       gttgtctggagattcagggcgccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAg                                            >  6:343793‑M2/30‑134 (MQ=255)
                                                                                                                             tggagattcagggggccagtctaCATGCTCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGCGGAGGTGGGTTCATCCATGATGATGCCTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTga                           >  4:341870‑M2/24‑145 (MQ=255)
                                                                                                                                  ctctTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcga                                                                >  7:345931‑M1/1‑23 (MQ=255)
                                                                                                                                     tttACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac               >  5:190975‑M1/1‑20 (MQ=255)
                                                                                                                                      agggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGc              <  1:364279‑M2/135‑1 (MQ=255)
                                                                                                                                       tACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac               <  7:15569‑M1/147‑130 (MQ=255)
                                                                                                                                       tACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac               <  8:79547‑M1/147‑130 (MQ=255)
                                                                                                                                        aagcaACTTATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagccctctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgc             <  1:273298‑M1/146‑132 (MQ=255)
                                                                                                                                        aCGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcc            >  6:59039‑M1/1‑17 (MQ=255)
                                                                                                                                         cGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcct           >  5:366007‑M1/1‑16 (MQ=255)
                                                                                                                                          gCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctc          <  5:311986‑M1/149‑135 (MQ=255)
                                                                                                                                            ccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACttt        >  3:349757‑M2/9‑149 (MQ=255)
                                                                                                                                            aaCTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcccttcgttataatgctcgaacgcctctg        >  1:141780‑M1/1‑13 (MQ=255)
                                                                                                                                            aaCTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctg        >  4:308424‑M1/1‑13 (MQ=255)
                                                                                                                                             cagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgatagat                      <  3:220533‑M2/127‑1 (MQ=255)
                                                                                                                                               tGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgc       >  8:271869‑M1/1‑10 (MQ=255)
                                                                                                                                                 aTTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgg                                                                   <  7:332061‑M1/85‑78 (MQ=255)
                                                                                                                                                 aTTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgg                                                                   >  8:332061‑M1/1‑8 (MQ=255)
                                                                                                                                                    cATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATc  >  7:242117/1‑147 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CGATATCGTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATC  >  NC_000913/4310269‑4310563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.