New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2775087 =59 (2.000)4 (0.150) 4/238 2.8 7.1% intergenic (+66/‑458) yfjW/ypjI CP4‑57 prophage; putative inner membrane protein/pseudogene, CP4‑57 putative prophage remnant;Phage or Prophage Related
?NC_000913 2775134 = 50 (1.850)intergenic (+113/‑411) yfjW/ypjI CP4‑57 prophage; putative inner membrane protein/pseudogene, CP4‑57 putative prophage remnant;Phage or Prophage Related
Rejected: Frequency below/above cutoff threshold.

TGGTTTAGGTCTGCTAGCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGC  >  NC_000913/2774940‑2775235
                                                                                                                                                   |                                                                                                                                                    
tGGTTTAGGTCTGCTAGCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGtttt                                                                                                                                                     >  2:33973/1‑149 (MQ=255)
    gcaccatttgcctacagtactccattcaacagctgctggcgcttccatgccgctggctcggcatatttctggcttttcaaccgctcagttctggcagttaaacaacagaaaatataggtatgggtaacgacaaaaaacgccacTTTa                                                                                                                                                   <  7:39325‑M1/4‑1 (MQ=255)
     tAGGTCTGCTAGCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTaaa                                                                                                                                                 <  8:116758/148‑1 (MQ=255)
     tAGGTCTGCTAGCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTaaa                                                                                                                                                 <  7:126393/148‑1 (MQ=255)
      caccatttgcctacagtactccattcaacagctgctggcgcttccatgccgctggctcggcatatttctggcttttcaaccgctcagttctggcagttaaacaacagaaaatatacgtatgggtaacgacaaaaacgccacTTTAAAg                                                                                                                                                <  2:31403‑M1/7‑1 (MQ=255)
      aGGTCTGCTAGCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAg                                                                                                                                                >  3:34177/1‑148 (MQ=255)
       ggTCTGCTAGCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCa                                                                                                                                              <  7:120397/149‑1 (MQ=255)
        catttgcctacagtactccattcaacagctgctggcgcttccatgccgctggctcggcatatttctggcttttcaaccgctcagttctggcagttaaacaacagaaaatataggtatgggtaacgacaaaaaacgccacTTTAAAGCAg                                                                                                                                             >  8:39325‑M1/140‑149 (MQ=255)
          atttgcctacagtactccattcaacagctgctggcgcttccatgccgctggctcggcatatttctggcttttcaaccgctcagttctggcagttaaacaacagaaaatataggtatgggtaacgacaaaaacgccacTTTAAAGCAgg                                                                                                                                            <  8:48737‑M1/11‑1 (MQ=255)
             cTAGCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGc                                                                                                                                           <  4:34177/146‑1 (MQ=255)
             cTAGCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCtt                                                                                                                                         <  1:33973/148‑1 (MQ=255)
              tAGCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGttt                                                                                                                                                      >  2:147005/1‑134 (MQ=255)
                gCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCa                                                                                                                                              >  4:93638/1‑140 (MQ=255)
                gCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCa                                                                                                                                              <  3:93638/140‑1 (MQ=255)
                         ataAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAgg                                                                                                                                            >  4:18710/1‑133 (MQ=255)
                         ataAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAgg                                                                                                                                            <  3:18710/133‑1 (MQ=255)
                          taAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGa                                                                                                                           >  6:31355/1‑149 (MQ=255)
                          taAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGa                                                                                                                           >  6:29312/1‑149 (MQ=255)
                            aaaTTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGaca                                                                                                                         <  1:150588/149‑1 (MQ=255)
                                        tcTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGc                                                                                                                              >  1:76090/1‑132 (MQ=255)
                                        tcTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGc                                                                                                                              <  2:76090/132‑1 (MQ=255)
                                              tttAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTa                                                                                                          >  2:153006/1‑146 (MQ=255)
                                              tttAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAg                                                                                                       >  8:62139/1‑149 (MQ=255)
                                              tttAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAg                                                                                                       >  6:81694/1‑149 (MQ=255)
                                                tAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTaaa                                                                                                        <  1:153006/146‑1 (MQ=255)
                                                    aaTGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAg                                                                                                       >  7:21770/1‑143 (MQ=255)
                                                    aaTGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAg                                                                                                       <  8:21770/143‑1 (MQ=255)
                                                      tgatgTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGttt                                                                                               <  5:29312/149‑1 (MQ=255)
                                                      tgatgTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGttt                                                                                               <  5:31355/149‑1 (MQ=255)
                                                      tgatgTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGttt                                                                                               <  2:12118/149‑1 (MQ=255)
                                                            gaatgaaAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGc                                                                                                              >  1:149438/1‑128 (MQ=255)
                                                            gaatgaaAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGc                                                                                                              <  2:149438/128‑1 (MQ=255)
                                                              tcggcatatttctggcttttcaaccgctcagttctggcagttaaacaacagaaaatataggtatgggtaacgacaaaaacgccacTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGc                                                                                                   >  8:14367‑M1/86‑137 (MQ=255)
                                                              tcggcatatttctggcttttcaaccgctcagttctggcagttaaacaacagaaaatataggtatgggtaacgacaaaaacgccacTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGc                                                                                                   <  7:14367‑M1/52‑1 (MQ=255)
                                                              atgaaAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGttttt                                                                                             <  8:8081/143‑1 (MQ=255)
                                                              atgaaAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGttttt                                                                                             >  7:8081/1‑143 (MQ=255)
                                                                gaaAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCa                                                                                                                                              >  2:110041/1‑92 (MQ=255)
                                                                gaaAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTAc                                                                                     >  2:145370/1‑149 (MQ=255)
                                                                         ctggcttttcaaccgctcagttctggcagttaaacaacagaaaatataggtatgggtaacgacaaaaacgccacTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTaaa                                                                                                        >  2:90122‑M1/75‑121 (MQ=255)
                                                                         ctggcttttcaaccgctcagttctggcagttaaacaacagaaaatataggtatgggtaacgacaaaaacgccacTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTaaa                                                                                                        <  1:90122‑M1/47‑1 (MQ=255)
                                                                           cTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCtat                                                                           <  7:62139/148‑1 (MQ=255)
                                                                            ttGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGt                                                                                                 >  7:26774/1‑125 (MQ=255)
                                                                            ttGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGt                                                                                                 <  8:26774/125‑1 (MQ=255)
                                                                            ttGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTatat                                                                         >  5:52598/1‑149 (MQ=255)
                                                                                aaCGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGacac                                                                                                                        >  5:17435/1‑98 (MQ=255)
                                                                                aaCGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGacac                                                                                                                        <  6:17435/98‑1 (MQ=255)
                                                                                 aCGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCt                                                                    <  1:145370/149‑1 (MQ=255)
                                                                                  caaccgctcagttctggcagttaaacaacagaaaatataggtatgggtaacgacaaaaacgccacttt                                                                                                                                                    <  6:16451‑M1/3‑1 (MQ=255)
                                                                                      tttGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCtgttgt                                                               <  6:102124/149‑1 (MQ=255)
                                                                                          gCTCCAATTGGAGGCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTaa                                                           <  6:52598/149‑1 (MQ=255)
                                                                                            tCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACt                                                         >  3:93216/1‑149 (MQ=255)
                                                                                                    gAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAAc                                                 >  5:34795/1‑149 (MQ=255)
                                                                                                      gCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACt                                                >  8:2364/1‑148 (MQ=255)
                                                                                                         tttttATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGc                                            >  2:24768/1‑149 (MQ=255)
                                                                                                          ttttATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTgg                                                                                                    >  5:54720/1‑92 (MQ=255)
                                                                                                          ttttATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTgg                                                                                                    <  6:54720/92‑1 (MQ=255)
                                                                                                               tGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGt                                                                                           <  1:59322/96‑1 (MQ=255)
                                                                                                               tGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGt                                                                                           >  2:59322/1‑96 (MQ=255)
                                                                                                               tGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTg                                       >  2:105455/1‑148 (MQ=255)
                                                                                                                gACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGa                                      >  7:87778/1‑148 (MQ=255)
                                                                                                                  cTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATAtttt                                                                      <  6:134208/114‑1 (MQ=255)
                                                                                                                   tatttattAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAg                                  >  1:31403/1‑149 (MQ=255)
                                                                                                                        attaAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAg                              <  4:93216/148‑1 (MQ=255)
                                                                                                                         ttaAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGTGCGGGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGa                             <  1:24768/148‑1 (MQ=255)
                                                                                                                         ttaAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGa                             >  7:6520/1‑148 (MQ=255)
                                                                                                                                    tAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGc                 >  4:84074/1‑149 (MQ=255)
                                                                                                                                             ccTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCAt        <  6:34795/149‑1 (MQ=255)
                                                                                                                                              cTGTTTTTAAAGGCGGCTTGAGCGTGAAGCGGACACTCATCCCTGCTTTAAAGTGGCGGTTTTGTCGTTACCCATAAGTAGATTTTCTGTTGTTTAACTGCCAGAAGTGAGCGGTTGAAAAGCCAGAAATATGAAGAGCCAGCGGCTTg       >  8:68219/1‑149 (MQ=255)
                                                                                                                                                   TTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAgc  <  2:102174‑M1/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TGGTTTAGGTCTGCTAGCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAACGCATTTGGCTCCAATTGGAGCCTTTTTATGACTATTTATTAAAATATCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGC  >  NC_000913/2774940‑2775235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.