Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 755,308 Δ102 bp coding (132‑233/390 nt) sdhC → succinate dehydrogenase, membrane subunit, binds cytochrome b556

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 755308 755409 102 47 [0] [0] 46 sdhC succinate dehydrogenase, membrane subunit, binds cytochrome b556

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 7553070 (0.000)39 (1.160) 37/222 0.1 100% coding (131/390 nt) sdhC succinate dehydrogenase, membrane subunit, binds cytochrome b556
?NC_000913 755410 = 0 (0.000)coding (234/390 nt) sdhC succinate dehydrogenase, membrane subunit, binds cytochrome b556

CCATCGCGTTTCCGGTGTGATCACCTTTGTTGCAGTGGGCATCCTGCTGTGGCTTCTGGGTACCAGCCTCTCTTCCCCTGAAGGTTTCGAGCAAGCTTCCGCGATTATGGGCAGCTTCTTCGTCAAATTTATCATGTGGGGCATCCTTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCAGGAGT  >  NC_000913/755263‑755553
                                                                                                                                                   |                                                                                                                                               
catgtgggcgttattcatgataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTa                                                                                                                                                >  5:100591‑M2/148‑149 (MQ=255)
             ttcatgataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGt                                                                                                                                    >  4:57554‑M2/135‑148 (MQ=255)
              tcatgataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGctct                                                                                                                                         <  3:76285‑M2/9‑1 (MQ=255)
              tcatgataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGctct                                                                                                                                         >  4:76285‑M2/134‑142 (MQ=255)
               catgataagaaatgtgaaaaaacaaagacctgttaatctggaccaacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTAt                                                                                                                                  <  6:79768‑M2/16‑1 (MQ=255)
                atgataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCa                                                                                                                                >  7:121299‑M2/132‑149 (MQ=255)
                  gataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGc                                                                                                                                      >  1:15612‑M2/130‑141 (MQ=255)
                  gataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGc                                                                                                                                      <  2:15612‑M2/12‑1 (MQ=255)
                          atgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTa                                                                                                                      <  3:57554‑M2/28‑1 (MQ=255)
                           tgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAg                                                                                                                     <  2:92497‑M2/29‑1 (MQ=255)
                           tgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCACTGGCGTATCACGTCGTCGTAg                                                                                                                     <  3:60840‑M2/29‑1 (MQ=255)
                                              gttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACatgatgat                                                                                                  >  2:135507‑M2/102‑149 (MQ=255)
                                               ttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACatgatgatg                                                                                                 >  4:134073‑M2/101‑149 (MQ=255)
                                               ttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACatgatga                                                                                                   <  4:76191‑M2/47‑1 (MQ=255)
                                                  atctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGAt                                                                                              <  2:188111‑M2/52‑1 (MQ=255)
                                                       gacctacagaccatccggttccccatcacggcgatagcgtcaattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTATGTATTCGCCACATGATGATGGAtttt                                                                                           <  8:121299‑M2/55‑1 (MQ=255)
                                                                   atccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGgaa                                                                               >  2:110848‑M2/81‑147 (MQ=255)
                                                                   atccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGgaa                                                                               <  1:110848‑M2/67‑1 (MQ=255)
                                                                        gttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACAt                                                                        >  4:62441‑M2/76‑149 (MQ=255)
                                                                            cccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCg                                                                     <  1:135507‑M2/77‑1 (MQ=255)
                                                                             ccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATc                                                                                                                                 >  5:31869‑M2/71‑87 (MQ=255)
                                                                             ccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATc                                                                                                                                 <  6:31869‑M2/17‑1 (MQ=255)
                                                                             ccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCg                                                                     >  1:210221‑M2/71‑147 (MQ=255)
                                                                                  acggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCgg                                                               <  3:62441‑M2/83‑1 (MQ=255)
                                                                                       gatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAAc                                                         <  6:100591‑M2/89‑1 (MQ=255)
                                                                                                  ttctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACAt                                                                        >  7:73295‑M2/50‑123 (MQ=255)
                                                                                                           gcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCttt                                     <  3:134073‑M2/109‑1 (MQ=255)
                                                                                                            cgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCg                                                                >  6:99782‑M2/40‑121 (MQ=255)
                                                                                                            cgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCg                                                                <  5:99782‑M2/82‑1 (MQ=255)
                                                                                                                   ggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGc                                                                 <  1:139670‑M2/81‑1 (MQ=255)
                                                                                                                   ggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGc                                                                 >  2:139670‑M2/33‑113 (MQ=255)
                                                                                                                       tgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTc                         <  2:210221‑M2/121‑1 (MQ=255)
                                                                                                                         atcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTcc                                                    >  5:110589‑M2/27‑120 (MQ=255)
                                                                                                                         atcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTcc                                                    <  6:110589‑M2/94‑1 (MQ=255)
                                                                                                                          tcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAAtc                                           <  4:45441‑M2/103‑1 (MQ=255)
                                                                                                                          tcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAAtc                                           >  3:45441‑M2/26‑128 (MQ=255)
                                                                                                                             cctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACGTTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCtt                   >  7:112280‑M2/23‑149 (MQ=255)
                                                                                                                                         tgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCttt                  <  3:15330‑M2/128‑1 (MQ=255)
                                                                                                                                         tgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCttt                  >  4:15330‑M2/11‑138 (MQ=255)
                                                                                                                                             catcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCggg                                                              <  7:151421‑M2/84‑1 (MQ=255)
                                                                                                                                             catcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCggg                                                              >  8:151421‑M2/7‑90 (MQ=255)
                                                                                                                                              atcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGc                                                                 >  6:26518‑M2/6‑86 (MQ=255)
                                                                                                                                              atcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCAGGAGt  >  4:93845‑M2/6‑149 (MQ=255)
                                                                                                                                              atcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCAGGAGt  >  4:91679‑M2/6‑149 (MQ=255)
                                                                                                                                                cctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCa       >  7:128185‑M2/4‑142 (MQ=255)
                                                                                                                                                cctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCAAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCa       <  8:128185‑M2/139‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                               
CCATCGCGTTTCCGGTGTGATCACCTTTGTTGCAGTGGGCATCCTGCTGTGGCTTCTGGGTACCAGCCTCTCTTCCCCTGAAGGTTTCGAGCAAGCTTCCGCGATTATGGGCAGCTTCTTCGTCAAATTTATCATGTGGGGCATCCTTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCAGGAGT  >  NC_000913/755263‑755553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: