New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3830353	49 (1.250)	6 (0.160)	6/260	3.8	11.6%	intergenic (+17/‑104)	xanP/yicH	xanthine permease/putative inner membrane‑anchored periplasmic AsmA family protein
	?	NC_000913	= 3830358	46 (1.260)					intergenic (+22/‑99)	xanP/yicH	xanthine permease/putative inner membrane‑anchored periplasmic AsmA family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCAGCAGCCGCTGATTTTGCAGTTTGCCCCTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGT  >  NC_000913/3830213‑3830502                                                                                                                                                  |                                                                                                                                                 tcAGCAGCCGCTGATTTTGCAGTTTGCCCCTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTa                                                                                                                                               >  1:16375/1‑149 (MQ=255) tcAGCAGCCGCTGATTTTGCAGTTTGCAACTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTTATTTTCCCACCAGAAAAACAGTAATTCACTGGCGTCGGTAAGATAATTa                                                                                                                                               >  5:43904/1‑149 (MQ=255)    gcagcCGCTGATTTTGCAGTTTGCCCCTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGTGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAAtt                                                                                                                                                <  7:30334/145‑1 (MQ=255)    gcagcCGCTGATTTTGCAGTTTGCCCCTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAAtt                                                                                                                                                >  8:30334/1‑145 (MQ=255)              aTTTTGCAGTTTGCCCCTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGtct                                                                                                                                   >  8:9995/1‑148 (MQ=255)                 ttGCAGTTTGCCCCTGAATTGCTGAAAAACGTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGGTGAATCTGATTTTCCCTCCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCAc                                                                                                                                <  6:43904/148‑1 (MQ=255)                    cAGTTTGCCCCTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACctct                                                                                                                            <  8:26454/149‑1 (MQ=255)                      gTTTGCCCCTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCttt                                                                                                                          <  3:126215/149‑1 (MQ=255)                       tttGCCCCTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAATTATCTTACcgccgccagt                                                                                                                                    <  8:68908/138‑5 (MQ=255)                       tttGCCCCTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAATTATCTTACcgccgccagt                                                                                                                                    >  7:68908/1‑134 (MQ=255)                          gCCCCTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAAc                                                                                                                       <  8:38821/148‑1 (MQ=255)                                  aTGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGc                                                                                                              <  2:16375/149‑1 (MQ=255)                                       tGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCtt                                                                                                           >  8:119684/1‑147 (MQ=255)                                         aaaaaCCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGa                                                                                                         <  7:119684/147‑1 (MQ=255)                                          aaaaCCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGa                                                                                                      >  8:34129/1‑149 (MQ=255)                                                 gCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCCCCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGcgcg                                                                                               >  3:123944/1‑149 (MQ=255)                                                     tcctccGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTaaa                                                                                           >  8:51483/1‑149 (MQ=255)                                                      cctccGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTgcgc                                                                                                >  3:16398/1‑143 (MQ=255)                                                      cctccGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTgcgc                                                                                                <  4:16398/143‑1 (MQ=255)                                                       ctccGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAAt                                                                                          <  1:180371/148‑1 (MQ=255)                                                        tccGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGa                                                                                                         <  2:7478/132‑1 (MQ=255)                                                        tccGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGa                                                                                                         >  1:7478/1‑132 (MQ=255)                                                        tccGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCg                                                                                        >  3:129376/1‑149 (MQ=255)                                                          cGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGt                                                                                       <  2:77029/148‑1 (MQ=255)                                                                 gccgcGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACt                                                                               >  7:41843/1‑149 (MQ=255)                                                                  ccgcGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTc                                                                              >  2:141744/1‑149 (MQ=255)                                                                    gcgggcggTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTccc                                                                            <  4:6707/149‑1 (MQ=255)                                                                         cggTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTAtg                                                                       <  7:9995/149‑1 (MQ=255)                                                                             aTTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCa                                                                   >  1:52049/1‑149 (MQ=255)                                                                              ttACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTa                                                                         <  8:23075/142‑1 (MQ=255)                                                                              ttACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCAATGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTa                                                                         >  7:23075/1‑142 (MQ=255)                                                                                  tGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGc                                                                    <  8:87455/143‑1 (MQ=255)                                                                                  tGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGc                                                                    >  7:87455/1‑143 (MQ=255)                                                                                    ccATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCAc                                                             <  6:72441/148‑1 (MQ=255)                                                                                    ccATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCAc                                                             <  3:138255/148‑1 (MQ=255)                                                                                          tGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATg                                                       >  8:70474/1‑148 (MQ=255)                                                                                               aaTCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGAc                                                 >  1:60697/1‑149 (MQ=255)                                                                                                aTCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGAc                                                 >  2:46070/1‑148 (MQ=255)                                                                                                   tGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCAt                                              >  4:16407/1‑148 (MQ=255)                                                                                                   tGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCAt                                              >  8:144219/1‑148 (MQ=255)                                                                                                        ttCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAAt                                         <  7:51483/148‑1 (MQ=255)                                                                                                           ccaccaGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTAt                                     >  2:44163/1‑149 (MQ=255)                                                                                                             accaGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCa                                                                                    <  6:113546/100‑1 (MQ=255)                                                                                                             accaGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCa                                                                                    >  5:113546/1‑100 (MQ=255)                                                                                                             accaGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTg                                   <  2:60697/149‑1 (MQ=255)                                                                                                              ccaGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTgg                                  <  7:144219/149‑1 (MQ=255)                                                                                                              ccaGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTgg                                  <  3:16407/149‑1 (MQ=255)                                                                                                                        aGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTAtt                                    >  2:64571/1‑137 (MQ=255)                                                                                                                        aGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTAtt                                    <  1:64571/137‑1 (MQ=255)                                                                                                                                           tAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGctc     >  6:12452/1‑149 (MQ=255)                                                                                                                                             aGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGctct    <  7:70474/148‑1 (MQ=255)                                                                                                                                                tAATTACAGCCGCAGTCTCACCTATTTAACCATTCACGCCTTGAGGATTGAGAGTAAATCGTGCATAACTCACTAATGTGCATTTCACGGGATGGAAGACCATGAAAATTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGt  >  8:74513/1‑147 (MQ=255)                                                                                                                                                  |                                                                                                                                                 TCAGCAGCCGCTGATTTTGCAGTTTGCCCCTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAATTCACTGGCGGCGGTAAGATAATTACCGCCGCAGTCTCACCTCTTTAACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGCATTTCACGGGATGGAAGACCATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGT  >  NC_000913/3830213‑3830502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.