New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1522008 =	38 (0.700)	4 (0.080)	4/250	NT	10.9%	coding (1058/2103 nt)	yncD	putative iron outer membrane transporter
	?	NC_000913	1522036 =	29 (0.560)					coding (1030/2103 nt)	yncD	putative iron outer membrane transporter

TGTAAATAGGGATCGATGTTCCACATCAGATTGCGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTGACTGGTACTGGGTCGTTTCTC  >  NC_000913/1521861‑1522155                                                                                                                                                    |                                                                                                                                                    tgagtgtgatgatgtatgccggagagcgagaaacgacccagtaccagtcaatacccatggcaccacaacttaacccgtcacatgcgggcggcgtgattaccctgcaacgccattaccagggaatagacagccgctggacacaccgtggt                                                                                                                                                    >  2:213284‑M1/148‑149 (MQ=255)      aTAGGGATCGATGTTCCACATCAGATTGCGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACg                                                                                                                                               >  7:75901/1‑149 (MQ=255)       tAGGGATCGATGTTCCACATCAGATTGCGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGt                                                                                                                                              <  3:129703/149‑1 (MQ=255)        gatgatgtatgccggagagcgagaaacgacccagtaccagtcaatacccatggcaccacaacttaacccgtcacatgcgggcggcgtgattacactgcaacgccattaccagggaatagacagacgctggacacaccgtgGTGAaca                                                                                                                                               <  4:4230‑M1/7‑2 (MQ=255)           gATCGATGTTCCACATCAGATTGCGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGAcc                                                                                                                                          <  7:158062/149‑1 (MQ=255)                   ttCCACATCAGATTGCGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGGATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGcc                                                                                                                                  <  6:33951/149‑1 (MQ=255)                   ttCCACATCAGATTGCGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGcc                                                                                                                                  >  6:188947/1‑149 (MQ=255)                       acaTCAGATTGCGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGt                                                                                                                                              >  6:45266/1‑133 (MQ=255)                       acaTCAGATTGCGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGt                                                                                                                                              <  5:45266/133‑1 (MQ=255)                              aTTGCGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGcc                                                                                                                                  >  3:204024/1‑138 (MQ=255)                              aTTGCGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGcc                                                                                                                                  <  4:204024/138‑1 (MQ=255)                              aTTGCGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTcaccac                                                                                                                       >  8:131930/1‑149 (MQ=255)                                  cGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGgt                                                                                                                    <  5:166574/148‑1 (MQ=255)                                  cGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATCTTTTCGTAGTTCAGGCCGGTAGTGCACGTGACCGGAACGCCCAGTTCACCACGgtg                                                                                                                   >  8:229180/1‑149 (MQ=255)                                              cGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCt                                                                                                       <  7:120574/149‑1 (MQ=255)                                               gCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTg                                                                                                      >  5:235888/1‑149 (MQ=255)                                                 aaCTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTc                                                                                                    >  7:213920/1‑149 (MQ=255)                                                      aCCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGACCGTGGCCGGAACGCCCAGTTCAGCCCGGTATGTCCAGCGGCGGTCTAGTc                                                                                               >  2:231608/1‑149 (MQ=255)                                                      aCCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTAtt                                                                                                <  5:147081/148‑1 (MQ=255)                                                        cTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTccc                                                                                             >  3:51296/1‑149 (MQ=255)                                                         tttttGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGgt                                                                                                                    >  6:104658/1‑125 (MQ=255)                                                         tttttGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGgt                                                                                                                    <  5:104658/125‑1 (MQ=255)                                                         atggcaccacaacttaacccgtcacatgcgggcggcgtgattaccctgcaacgccattaccagggaatagacagccgctggacacaccgtgGTGAACGTGACCGGAACGCCCAGTTCACCACGgtgtgt                                                                                                                <  8:162005‑M1/38‑1 (MQ=255)                                                         atggcaccacaacttaacccgtcacatgcgggcggcgtgattaccctgcaacgccattaccagggaatagacagccgctggacacaccgtgGTGAACGTGACCGGAACGCCCAGTTCACCACGgtgtgt                                                                                                                >  7:162005‑M1/92‑129 (MQ=255)                                                           tttGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCt                                                                                            <  7:131930/147‑1 (MQ=255)                                                               cccGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAAt                                                                                      >  6:5251/1‑149 (MQ=255)                                                                      ttaacccgtcacatgcgggcggcgtgattaccctgcaacgccattaccagggaatagacagccgctggacacaccgtgGTGAACGTGACCGGAACGCCCAGTTcaccac                                                                                                                       >  3:133790‑M1/79‑109 (MQ=255)                                                                      ttaacccgtcacatgcgggcggcgtgattaccctgcaacgccattaccagggaatagacagccgctggacacaccgtgGTGAACGTGACCGGAACGCCCAGTTcaccac                                                                                                                       <  4:133790‑M1/31‑1 (MQ=255)                                                                      tCCGGCATGCCGCTAATCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTATCGTAGTTCAGGCCGGTAGTGAACCTGACCGGAACGCCCAGTTCACAACGGTGTGTCCAGCTGCTGTCTATTCCCTGGTAATGGCGTTg                                                                               >  5:10277/1‑149 (MQ=255)                                                                         ggCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAg                                                                            <  6:235888/149‑1 (MQ=255)                                                                          gCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAgg                                                                           <  7:249132/149‑1 (MQ=255)                                                                                 gCTACTCAGGCGGAAGTTATTGTCGGACTTGCGGTTTTGACTCATGTTTTCGTAGTTCAGGCCTGTAGTGAACGTGACCGGAACGCCCAGTTCTCCACGGTGTGTCCAGGGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCa                                                                    <  6:10277/149‑1 (MQ=255)                                                                                  cTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCAc                                                                   <  5:5251/149‑1 (MQ=255)                                                                                               aGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCACGCCGCCCGCAtgt                                                      >  4:207685/1‑149 (MQ=255)                                                                                                                   ttttCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACAACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGTGGTGc                                  >  6:214396/1‑149 (MQ=255)                                                                                                                          tCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGc                                                                              >  2:156099/1‑98 (MQ=255)                                                                                                                          tCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGc                                                                              <  1:156099/98‑1 (MQ=255)                                                                                                                            aTGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGTGGTGCCATGGGTa                          <  8:213920/148‑1 (MQ=255)                                                                                                                              gTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCGGTCTATTCCCTGGTAATGGCGTTGCAGGGTCATCACGCCGCCCGCATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTg                       >  2:213177/1‑149 (MQ=255)                                                                                                                                tttCGTAGGTCAGGCCGGTAGTGAACGTGCCCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTGAc                     >  4:121218/1‑149 (MQ=255)                                                                                                                                   cGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTGACTg                   <  5:188947/148‑1 (MQ=255)                                                                                                                                     tAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTGACTGGTa                <  5:10443/149‑1 (MQ=255)                                                                                                                                          cAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGTTGTGCCATGGGTATTGACTGGTACTgg            <  3:207685/148‑1 (MQ=255)                                                                                                                                           aGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTGACTGGTACTGGGt          >  2:686/1‑149 (MQ=255)                                                                                                                                               cGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTGACTGGTACTGGGTCGtt      >  8:43962/1‑149 (MQ=255)                                                                                                                                                    GTGAACGTGATCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGGGGTGCCATGGGTATTGACTGGTACTGGGTCGTTtctc  >  8:75901‑M1/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                    TGTAAATAGGGATCGATGTTCCACATCAGATTGCGTTCGTCGCGACGCAACTCACCTTTTTGCCCGTACTCCGGCATGCCGCTATTCAGGCGGAAGTTATTGTAGCCCTTGCGGTTTTCACTCATGTTTTCGTAGTTCAGGCCGGTAGTGAACGTGACCGGAACGCCCAGTTCACCACGGTGTGTCCAGCGGCTGTCTATTCCCTGGTAATGGCGTTGCAGGGTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTGACTGGTACTGGGTCGTTTCTC  >  NC_000913/1521861‑1522155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.