New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1170033 =	80 (0.910)	5 (0.060)	5/256	NT	6.1%	coding (342/963 nt)	ldtC	L,D‑transpeptidase linking Lpp to murein
	?	NC_000913	= 1340069	75 (0.860)					coding (740/765 nt)	pgpB	phosphatidylglycerophosphatase B

GGGAAGCCGCCTGCTGCTCGGGATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGTTGACCATAATTTATT  >  NC_000913/1339923‑1340215                                                                                                                                                   |                                                                                                                                                   gggAAGCCGCCTGCTGCTCGGGATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAg                                                                                                                                                  >  7:156824/1‑149 (MQ=255)   gAAGCCGCCTGCTGCTCGGGATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAgcg                                                                                                                                                <  1:322777/149‑1 (MQ=255)       ccgccTGCTGCTCGGGATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAAc                                                                                                                                            <  8:156824/149‑1 (MQ=255)           ctgctgCTCGGGATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACgaga                                                                                                                                        <  8:245354/149‑1 (MQ=255)               tgctCGGGATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGaa                                                                                                                                       <  3:214972/146‑1 (MQ=255)               tgctCGGGATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGaa                                                                                                                                       >  4:214972/1‑146 (MQ=255)                  tCGGGATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGT‑GGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGa                                                                                                                                  >  4:86237/1‑147 (MQ=255)                   cGGGATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTTGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGaaa                                                                                                                                <  4:192365/149‑1 (MQ=255)                   cGGGATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGaaa                                                                                                                                <  8:210061/149‑1 (MQ=255)                    gggATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGaa                                                                                                                                 <  7:62247/147‑1 (MQ=255)                        tGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAAc                                                                                                                                            >  4:15162/1‑132 (MQ=255)                        tGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAAc                                                                                                                                            <  3:15162/132‑1 (MQ=255)                         gCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATatagagacgcagctccgcaatgttgc                                                                                                                          <  4:32777‑M2/149‑27 (MQ=255)                          cATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATatagagacgcagctccgcaatgttgat                                                                                                                         >  1:182601‑M2/1‑122 (MQ=255)                               gCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGt                                                                                                                    <  6:176204/149‑1 (MQ=255)                                 cACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGtt                                                                                                                   >  8:371083/1‑148 (MQ=255)                                  aCGCGATCAGGTAGTAGCTACGTTGAATTCGTGCGCGCTGGTGGCGCTGGCAACGTGGCTTGCGCAACGAATATGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTAAACGCTgg                                                                                                                     >  3:347918/1‑145 (MQ=255)                                           ggTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGaa                                                                                                        >  1:327362/1‑149 (MQ=255)                                            gtagtaGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTc                                                                                                            <  2:56394/144‑1 (MQ=255)                                             tagtagCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACgag                                                                                                                                         <  5:318114/114‑1 (MQ=255)                                             tagtagCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACgag                                                                                                                                         >  6:318114/1‑114 (MQ=255)                                               gtagCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTa                                                                                                    <  4:145913/149‑1 (MQ=255)                                               gtagCTACGTTGATTTCGGGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCCACGAATTTGTGGGCCATTAACACCACCTGCGGAAGCAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATGTTCCGAAtt                                                                                                      >  2:257503/1‑147 (MQ=255)                                                tagCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAg                                                                                                   >  2:173827/1‑149 (MQ=255)                                                  gCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGcc                                                                                                 >  3:345864/1‑149 (MQ=255)                                                  gCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGcc                                                                                                 >  3:340351/1‑149 (MQ=255)                                                       gTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTa                                                                                             >  2:103845/1‑148 (MQ=255)                                                       gTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTa                                                                                             >  5:336120/1‑148 (MQ=255)                                                        ttGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTaaa                                                                                           >  5:194820/1‑149 (MQ=255)                                                           aTTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATatagagacgcagctccgcaatgttgatcacaatgccttcgcgcggcgcatctggaagta                                                                                         >  4:243093‑M2/1‑89 (MQ=255)                                                            tttCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCCCCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAatca                                                                                        >  8:34490/1‑148 (MQ=255)                                                              tCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAatcatc                                                                                      <  1:103845/148‑1 (MQ=255)                                                                gTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAatc                                                                                         <  6:264434/143‑1 (MQ=255)                                                                gTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAatc                                                                                         >  5:264434/1‑143 (MQ=255)                                                                 tGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAgcg                                                                                                                                                <  6:126498/87‑1 (MQ=255)                                                                 tGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAgcg                                                                                                                                                >  5:126498/1‑87 (MQ=255)                                                                    gcgcTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATatagagacgcagctccgcaatgttgatcacaatgccttcgcgcggcgcatctggaagtagggtttgcaa                                                                               >  2:273447‑M2/1‑80 (MQ=255)                                                                     cgcTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAAttt                                                                                                     >  8:85444/1‑126 (MQ=255)                                                                     cgcTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAAttt                                                                                                     <  7:85444/126‑1 (MQ=255)                                                                     cgcTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAat                                                                                          <  4:13864/137‑1 (MQ=255)                                                                     cgcTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAat                                                                                          >  3:13864/1‑137 (MQ=255)                                                                     cgcTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGc                                                                              >  3:29508/1‑149 (MQ=255)                                                                        tggtggCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCgtg                                                                           >  3:14030/1‑149 (MQ=255)                                                                          gtggcggtggcAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCgtgt                                                                          <  3:267460/148‑1 (MQ=255)                                                                             gcggtggcAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAatcatc                                                                                      >  8:11258/1‑133 (MQ=255)                                                                             gcggtggcAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAatcatc                                                                                      <  7:11258/133‑1 (MQ=255)                                                                             gcggtggcAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGa                                                                       <  1:173827/148‑1 (MQ=255)                                                                             gcggtggcAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGAt                                                                      >  6:332594/1‑149 (MQ=255)                                                                             gcggtggcAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGAt                                                                      <  6:194820/149‑1 (MQ=255)                                                                                  ggcAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCAt                                                                 >  7:214069/1‑149 (MQ=255)                                                                                   gcAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCAtt                                                                >  6:321649/1‑149 (MQ=255)                                                                                   gcAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCAtt                                                                <  5:321649/149‑1 (MQ=255)                                                                                    cAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCAttt                                                               <  2:327362/149‑1 (MQ=255)                                                                                     aaCGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTc                                                              >  6:58420/1‑149 (MQ=255)                                                                                     aaCGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTc                                                              >  1:312995/1‑149 (MQ=255)                                                                                      aCGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCg                                                             <  8:26687/149‑1 (MQ=255)                                                                                           gCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGa                                                         <  4:29508/148‑1 (MQ=255)                                                                                             ttGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGcc                                                                                                 >  2:365390/1‑106 (MQ=255)                                                                                             ttGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGcc                                                                                                 <  1:365390/106‑1 (MQ=255)                                                                                             ttGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGCAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGATAACGCTGGTTGAGTTTCCGAATTTAGCCCTTAAAACATCAACAATGCGTGTGGATGCCATTTCGCAGCCgg                                                      >  2:187525/1‑149 (MQ=255)                                                                                               gcgcAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGgc                                                     <  7:371083/148‑1 (MQ=255)                                                                                                cgcAACGAATTTGTGGTCCATTACCACCACCTTCTGAAGTTAATCGCGAAATAGCGCAAGGAGATCATGAAAGTTTACGCTGGTTGATTTTCCGAATTTAGCCCTTTAATCATCAACAATGGGTGTGGATGCCATTTCGCAGACGgggc                                                   <  4:347918/149‑1 (MQ=255)                                                                                                 gcAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGgcgc                                                   >  2:67932/1‑148 (MQ=255)                                                                                                   aaCGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCATTAAATCATCAACAATGCGTGTGGCTGCCATTTCGCAGACGGCGCGa                                                 >  4:349793/1‑148 (MQ=255)                                                                                                     cGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGaaaa                                              <  7:156207/149‑1 (MQ=255)                                                                                                      gAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATatagagacgcagctccgcaatgttgatcacaatgccttcgcgcggcgcatctggaagtagggtttgcaacgggatcgttaacacgctccccgcgcgcggtacg                                             <  5:90307‑M2/149‑104 (MQ=255)                                                                                                      gAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAGCAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATTCCATTTCGCAGACGGCGCGAAAAt                                             <  7:120131/149‑1 (MQ=255)                                                                                                      gAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAAt                                             >  2:64587/1‑149 (MQ=255)                                                                                                             tgGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACtt                                      >  4:332059/1‑149 (MQ=255)                                                                                                               ggCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACttt                                     >  1:172942/1‑148 (MQ=255)                                                                                                                    ttAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAggg                               >  7:129123/1‑149 (MQ=255)                                                                                                                        caccacCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGAGTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCTCGAAAATGGTACTTTAATGGGCTAt                           >  7:373799/1‑149 (MQ=255)                                                                                                                               tGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTaaa                                  >  8:374060/1‑135 (MQ=255)                                                                                                                               tGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTaaa                                  <  7:374060/135‑1 (MQ=255)                                                                                                                                   gaagaaAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCGCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGtt                >  5:9976/1‑149 (MQ=255)                                                                                                                                   gaagaaAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGtt                <  8:129123/149‑1 (MQ=255)                                                                                                                                    aagaaAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGTTTGATTTTACGAATTTAGCCCTTAAATCAAAAACAATTCTTGTGGATGAAATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGtt                >  6:151331/1‑148 (MQ=255)                                                                                                                                    aagaaAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGtt                >  5:400226/1‑148 (MQ=255)                                                                                                                                    aagaaAATCGAGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATATCGCAGACGGCGCGAAAATGGTACTTTAAAGTGCTAGTGCGGTTAGTTg               >  8:194194/1‑149 (MQ=255)                                                                                                                                     agaaCATCGCGAAATAGCGCAACGAGAACAAGAAAGTTACCGCTGGTTGATTTTCCGACTTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGTTGa              <  1:257503/149‑1 (MQ=255)                                                                                                                                     agaaAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGTTGa              <  2:312995/149‑1 (MQ=255)                                                                                                                                           tCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGTTGACCATaa        >  4:188556/1‑149 (MQ=255)                                                                                                                                           tCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGTTGACCATaa        <  1:67932/149‑1 (MQ=255)                                                                                                                                             gcgAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGTTGACCATAAtt      >  2:297404/1‑149 (MQ=255)                                                                                                                                                aaaTAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGTTGACCATAATTTAt   <  2:206614/149‑1 (MQ=255)                                                                                                                                                 aaTAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGTTGACCATAATTTAtt  <  3:332059/149‑1 (MQ=255)                                                                                                                                                 aaTAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGTTGACCATAATTTAtt  <  7:126718/149‑1 (MQ=255)                                                                                                                                                  aTAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAAt                                             <  1:49895/105‑1 (MQ=255)                                                                                                                                                  aTAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCAGCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAAt                                             >  2:49895/1‑105 (MQ=255)                                                                                                                                                   |                                                                                                                                                   GGGAAGCCGCCTGCTGCTCGGGATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAACGCTGGTTGATTTTCCGAATTTAGCCCTTAAATCATCAACAATGCGTGTGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGTTGACCATAATTTATT  >  NC_000913/1339923‑1340215

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.