New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 409601689 (0.980)4 (0.050) 4/254 NT 4.4% coding (1433/1470 nt) rhaB rhamnulokinase
?NC_000913 = 4096038 90 (1.040)coding (1411/1470 nt) rhaB rhamnulokinase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 111 total aligned reads displayed.

GTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGA  >  NC_000913/4095869‑4096164
                                                                                                                                                   |                                                                                                                                                    
gTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAAt                                                                                                                                                     <  7:16848/149‑1 (MQ=255)
 tGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTTTTACCATAGCTCCCAGGCCTGTTCCAGTTCAGTGGTCATGCGCAAAGCACCTTTGACTGACGTGTAGAGTGAATc                                                                                                                                                    >  7:324450/1‑149 (MQ=255)
 tGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATc                                                                                                                                                    >  1:259164/1‑149 (MQ=255)
     ttGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTgcg                                                                                                                                                >  4:151684/1‑149 (MQ=255)
     ttGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTgcg                                                                                                                                                >  6:147663/1‑149 (MQ=255)
        aaaCGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCca                                                                                                                                             <  3:151684/149‑1 (MQ=255)
        aaaCGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGGCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCca                                                                                                                                             <  1:18872/149‑1 (MQ=255)
              gTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAAattgcccactatgtg                                                                                                                                       >  7:166334‑M1/1‑134 (MQ=255)
              gTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGt                                                                                                                                       >  1:246244/1‑149 (MQ=255)
               tAAACGATCAAGTTGGCGCAGCGCCTCCTCGATATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTg                                                                                                                                      <  7:300362/149‑1 (MQ=255)
                 aaCGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTgg                                                                                                                                     <  4:29767/148‑1 (MQ=255)
                     aTCAAGTTGGCGCAGCGCCTACTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTTAATCTGCGCCCCATAGTGGGCAAt                                                                                                                                >  2:298843/1‑149 (MQ=255)
                           ttGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATttcact                                                                                                                          >  8:114399‑M2/1‑143 (MQ=255)
                               cgcAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCa                                                                                                                      <  6:354712/149‑1 (MQ=255)
                                 cAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAgg                                                                                                                    <  8:148844/149‑1 (MQ=255)
                                     gcCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTa                                                                                                                <  4:357969/149‑1 (MQ=255)
                                     gcCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTGCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTa                                                                                                                <  2:407823/149‑1 (MQ=255)
                                      cctcctCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTGGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAg                                                                                                               <  3:31787/149‑1 (MQ=255)
                                        tcctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAggg                                                                                                             >  3:38378/1‑149 (MQ=255)
                                          ctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAAattgcccactatgtggcgcagattcactctacacgacagacaa                                                                                                           <  8:166334‑M1/149‑44 (MQ=255)
                                          ctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAggg                                                                                                             <  2:140552/147‑1 (MQ=255)
                                          ctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAggg                                                                                                             <  3:310279/147‑1 (MQ=255)
                                          ctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGGCAGGATTAgggg                                                                                                            <  6:353219/148‑1 (MQ=255)
                                           tcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCcac                                                                                                                                            >  3:281631/1‑115 (MQ=255)
                                           tcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCcac                                                                                                                                            <  4:281631/115‑1 (MQ=255)
                                           tcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCACAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGt                                                                                                           >  3:246310/1‑148 (MQ=255)
                                             gACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTa                                                                                                          >  7:347032/1‑147 (MQ=255)
                                              aCATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAg                                                                                                       <  8:349435/149‑1 (MQ=255)
                                                 tCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAggtg                                                                                                    >  7:226357/1‑149 (MQ=255)
                                                 tCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAggt                                                                                                     >  8:287018/1‑148 (MQ=255)
                                                 tCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAggt                                                                                                     <  7:287018/148‑1 (MQ=255)
                                                   aaTCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAggtggt                                                                                                  <  1:217556/149‑1 (MQ=255)
                                                    aTCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAggtggt                                                                                                  >  7:262813/1‑148 (MQ=255)
                                                     tCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAAattgcccactatgtggcgcagattcactctaca                                                                                                                     >  3:336365‑M1/1‑95 (MQ=255)
                                                     tCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAAattgcccactatgtggcgcagattcactctaca                                                                                                                     <  4:336365‑M1/128‑34 (MQ=255)
                                                       ccccccGCCGCGACACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCCTGCGCAAAGCGCCGTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGa                                                                                              <  6:294180/149‑1 (MQ=255)
                                                       cccACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGa                                                                                              <  5:248186/149‑1 (MQ=255)
                                                              ccgcGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCgg                                                                                       >  6:143299/1‑149 (MQ=255)
                                                                gcgAAACGCTGTTTCGCTAGCTGCCAGGCCTGTTCCAGTTGAGTGGGCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCggtg                                                                                     <  8:324450/149‑1 (MQ=255)
                                                                gcgAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCggtg                                                                                     <  3:383406/149‑1 (MQ=255)
                                                                     aCGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCt                                                                                >  5:72326/1‑149 (MQ=255)
                                                                               gCTAGCTCCCAGGCCTGTTACAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGa                                                                      >  8:20471/1‑149 (MQ=255)
                                                                                    cTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAggg                                                                                                             >  1:71786/1‑105 (MQ=255)
                                                                                    cTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAggg                                                                                                             <  2:71786/105‑1 (MQ=255)
                                                                                       ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGTGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGAAGGAAat                                                               >  5:342846/1‑148 (MQ=255)
                                                                                       ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAat                                                               >  4:104130/1‑148 (MQ=255)
                                                                                       ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAat                                                               >  1:265906/1‑148 (MQ=255)
                                                                                        cAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTgacgac                                                                          <  3:368286/136‑1 (MQ=255)
                                                                                        cAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTgacgac                                                                          >  4:368286/1‑136 (MQ=255)
                                                                                         aGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTg                                                                               >  2:59919/1‑130 (MQ=255)
                                                                                         aGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTg                                                                               <  1:59919/130‑1 (MQ=255)
                                                                                          ggCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAatcatc                                                           >  1:19646/1‑149 (MQ=255)
                                                                                           ggcTGTTCCAGTTGAGTGGTCATGCGCATAGCTCCTTTGTCTGGCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAatcatc                                                           <  5:50755/146‑1 (MQ=255)
                                                                                                ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCCCATAGTGGGCAATTTCACTGTCAGGAGTAGGGGGAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGATATCATGCACAtt                                                     >  2:245878/1‑149 (MQ=255)
                                                                                                ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTa                                                                                                                >  6:72377/1‑90 (MQ=255)
                                                                                                ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTa                                                                                                                <  5:72377/90‑1 (MQ=255)
                                                                                                ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAtt                                                     >  4:335613/1‑149 (MQ=255)
                                                                                                   cAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgtt                                                  <  2:259164/149‑1 (MQ=255)
                                                                                                   cAGTTGAGTGGGCATGCGCAAAGCTCATTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgt                                                   <  3:316641/148‑1 (MQ=255)
                                                                                                    aGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTAACTGTCAGGATTAGGGGTAAAGGTGGTAAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgtt                                                  >  6:290638/1‑148 (MQ=255)
                                                                                                     gTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGa                                                <  6:72326/149‑1 (MQ=255)
                                                                                                      ttGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAg                                               >  7:39155/1‑149 (MQ=255)
                                                                                                      ttGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAg                                               <  7:20471/149‑1 (MQ=255)
                                                                                                        gAGTGGTCATGCTCAAATCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCATTTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGt                                              <  1:298843/148‑1 (MQ=255)
                                                                                                        gAGTGCTCATGCGAAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTAAACTGTCAGGATTAGGGGTAAAGGTGGGCAGTTTCGCGGTGGTGCTGACGACCTGACGTAAATCATCCACATTGTTGAg                                               <  4:266744/147‑1 (MQ=255)
                                                                                                           tGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCAt                                          >  8:69500/1‑149 (MQ=255)
                                                                                                            ggTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATc                                         <  4:329676/149‑1 (MQ=255)
                                                                                                             gTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATcc                                        <  5:147663/149‑1 (MQ=255)
                                                                                                             gTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATc                                         <  5:101904/148‑1 (MQ=255)
                                                                                                             gTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATc                                         <  2:246244/148‑1 (MQ=255)
                                                                                                                 tGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCgg                                                                                       <  4:158097/98‑1 (MQ=255)
                                                                                                                 tGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCgg                                                                                       >  3:158097/1‑98 (MQ=255)
                                                                                                                 tGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCg                                    >  7:49092/1‑149 (MQ=255)
                                                                                                                    gcAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCa                                 <  8:226357/149‑1 (MQ=255)
                                                                                                                      aaaGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCTCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTACATCCAGCGTCAt                                >  3:267351/1‑148 (MQ=255)
                                                                                                                      aaaGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCAt                                >  3:370499/1‑148 (MQ=255)
                                                                                                                          cTCCTTTGGCTGTCGTGTAGAGTGTATCTGCGCCACATAGTGGGCAATTTCACTGGCGGGCTTCGGGGTAAAGGTGGGCAGACTCGCGGGGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACt                           <  2:79163/149‑1 (MQ=255)
                                                                                                                             cTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGa                        <  8:39155/149‑1 (MQ=255)
                                                                                                                             cTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGa                        <  2:19646/149‑1 (MQ=255)
                                                                                                                               ttGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATttcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtggggattgatgtcgag                      <  8:166334‑M2/149‑107 (MQ=255)
                                                                                                                                 gtctgtcGGGTAGAGTGAATCTGCGCCCCATAGTGGGCAATGTCACTGTCAGCATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCGGTCGACCTTACGGAAATCATCCCCATGGTTTCGTTCATCCCGCGGCATTAACTGGAGGcc                    >  6:281757/1‑149 (MQ=255)
                                                                                                                                  tctgtcGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCg                   <  3:282360/149‑1 (MQ=255)
                                                                                                                                      tcGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGata                <  5:370059/148‑1 (MQ=255)
                                                                                                                                      tcGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGa                  <  8:262813/146‑1 (MQ=255)
                                                                                                                                      tcGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGa                  <  5:89193/146‑1 (MQ=255)
                                                                                                                                         tgtAGAGTGAATCTGCGCCACATAGTGGGCAATttcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtgggga                                 <  4:336365‑M2/128‑96 (MQ=255)
                                                                                                                                         tgtAGAGTGAATCTGCGCCACATAGTGGGCAATttcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtgggga                                 >  3:336365‑M2/1‑33 (MQ=255)
                                                                                                                                         tgtAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGc            >  3:295256/1‑149 (MQ=255)
                                                                                                                                              agTGAAattgcccactatgtggcgcagattcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtggggattgatgtcgaggaggcgctgcgccaa       >  8:114399‑M1/1‑6 (MQ=255)
                                                                                                                                              agTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGGCGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAAc                            <  3:221466/128‑1 (MQ=255)
                                                                                                                                              agTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGGCGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAAc                            >  4:221466/1‑128 (MQ=255)
                                                                                                                                              agTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGc       <  8:347032/149‑1 (MQ=255)
                                                                                                                                               gTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCg      <  3:74589/149‑1 (MQ=255)
                                                                                                                                               gTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCg      <  3:266133/149‑1 (MQ=255)
                                                                                                                                                tGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGt     >  7:69136/1‑149 (MQ=255)
                                                                                                                                                  aaTCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGATGACGACATGACGGAACTCATCCACATTGTTGAGTTCATCCAGAGTCATTAACTGGATGCCGATATTGCCGAGCGTCg   <  4:246310/149‑1 (MQ=255)
                                                                                                                                                   aattgcccactatgtggcgcagattcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtggggattgatgtcgaggaggcgctgcgccaacttga  <  8:200827‑M1/149‑149 (MQ=255)
                                                                                                                                                   aattgcccactatgtggcgcagattcactctacacgacagacaaaggagctttgagcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtggggattgatgtcgaggaggcgctgcgccaacttg   >  3:371933‑M1/1‑1 (MQ=255)
                                                                                                                                                   aTCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGa  <  3:335613/149‑1 (MQ=255)
                                                                                                                                                   aTCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGGGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGa  <  4:249605/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGA  >  NC_000913/4095869‑4096164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.