New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 409601689 (0.980)4 (0.050) 4/254 NT 4.4% coding (1433/1470 nt) rhaB rhamnulokinase
?NC_000913 = 4096038 90 (1.040)coding (1411/1470 nt) rhaB rhamnulokinase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 103 total aligned reads displayed.

ATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGAGGCTTCAACAGGCCCGGCGATC  >  NC_000913/4095890‑4096186
                                                                                                                                                    |                                                                                                                                                    
aTCAAGTTGGCGCAGCGCCTACTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTTAATCTGCGCCCCATAGTGGGCAAt                                                                                                                                                      >  2:298843/1‑149 (MQ=255)
 tCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATt                                                                                                                                                     <  8:200827‑M2/149‑2 (MQ=255)
  cAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCTCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATt                                                                                                                                                     >  3:371933‑M2/1‑147 (MQ=255)
      ttGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATttcact                                                                                                                                                >  8:114399‑M2/1‑143 (MQ=255)
          cgcAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCa                                                                                                                                            <  6:354712/149‑1 (MQ=255)
            cAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAgg                                                                                                                                          <  8:148844/149‑1 (MQ=255)
                gcCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTa                                                                                                                                      <  4:357969/149‑1 (MQ=255)
                gcCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTGCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTa                                                                                                                                      <  2:407823/149‑1 (MQ=255)
                 cctcctCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTGGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAg                                                                                                                                     <  3:31787/149‑1 (MQ=255)
                   tcctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAggg                                                                                                                                   >  3:38378/1‑149 (MQ=255)
                     ctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAggg                                                                                                                                   <  2:140552/147‑1 (MQ=255)
                     ctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAggg                                                                                                                                   <  3:310279/147‑1 (MQ=255)
                     ctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGGCAGGATTAgggg                                                                                                                                  <  6:353219/148‑1 (MQ=255)
                      tcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCACAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGt                                                                                                                                 >  3:246310/1‑148 (MQ=255)
                       cGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTa                                                                                                                                >  7:349435/1‑148 (MQ=255)
                        gACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTa                                                                                                                                >  7:347032/1‑147 (MQ=255)
                         aCATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAg                                                                                                                             <  8:349435/149‑1 (MQ=255)
                            tCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCATGATTATGGGTAAAgg                                                                                                                            >  6:101904/1‑147 (MQ=255)
                            tCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAggtg                                                                                                                          >  7:226357/1‑149 (MQ=255)
                            tCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAggt                                                                                                                           >  8:287018/1‑148 (MQ=255)
                            tCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAggt                                                                                                                           <  7:287018/148‑1 (MQ=255)
                              aaTCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAggtggt                                                                                                                        <  1:217556/149‑1 (MQ=255)
                               aTCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAggtggt                                                                                                                        >  7:262813/1‑148 (MQ=255)
                                tCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAggtggt                                                                                                                        >  6:89193/1‑147 (MQ=255)
                                  ccccccGCCGCGACACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCCTGCGCAAAGCGCCGTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGa                                                                                                                    <  6:294180/149‑1 (MQ=255)
                                  cccACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGa                                                                                                                    <  5:248186/149‑1 (MQ=255)
                                         ccgcGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCgg                                                                                                             >  6:143299/1‑149 (MQ=255)
                                           gcgAAACGCTGTTTCGCTAGCTGCCAGGCCTGTTCCAGTTGAGTGGGCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCggtg                                                                                                           <  8:324450/149‑1 (MQ=255)
                                           gcgAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCggtg                                                                                                           <  3:383406/149‑1 (MQ=255)
                                                aCGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCt                                                                                                      >  5:72326/1‑149 (MQ=255)
                                                          gCTAGCTCCCAGGCCTGTTACAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGa                                                                                            >  8:20471/1‑149 (MQ=255)
                                                               cTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAggg                                                                                                                                   <  2:71786/105‑1 (MQ=255)
                                                               cTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAggg                                                                                                                                   >  1:71786/1‑105 (MQ=255)
                                                                  ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGTGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGAAGGAAat                                                                                     >  5:342846/1‑148 (MQ=255)
                                                                  ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAat                                                                                     >  4:266133/1‑148 (MQ=255)
                                                                  ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAat                                                                                     >  1:265906/1‑148 (MQ=255)
                                                                  ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAat                                                                                     >  4:104130/1‑148 (MQ=255)
                                                                   cAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTgacgac                                                                                                >  4:368286/1‑136 (MQ=255)
                                                                   cAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTgacgac                                                                                                <  3:368286/136‑1 (MQ=255)
                                                                    aGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTg                                                                                                     >  2:59919/1‑130 (MQ=255)
                                                                    aGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTg                                                                                                     <  1:59919/130‑1 (MQ=255)
                                                                     ggCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAatcatc                                                                                 >  1:19646/1‑149 (MQ=255)
                                                                      ggcTGTTCCAGTTGAGTGGTCATGCGCATAGCTCCTTTGTCTGGCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAatcatc                                                                                 <  5:50755/146‑1 (MQ=255)
                                                                         tGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCcaca                                                                             >  4:74589/1‑149 (MQ=255)
                                                                           ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCCCATAGTGGGCAATTTCACTGTCAGGAGTAGGGGGAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGATATCATGCACAtt                                                                           >  2:245878/1‑149 (MQ=255)
                                                                           ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTa                                                                                                                                      <  5:72377/90‑1 (MQ=255)
                                                                           ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTa                                                                                                                                      >  6:72377/1‑90 (MQ=255)
                                                                           ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAtt                                                                           >  4:335613/1‑149 (MQ=255)
                                                                              cAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgtt                                                                        <  2:259164/149‑1 (MQ=255)
                                                                              cAGTTGAGTGGGCATGCGCAAAGCTCATTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgt                                                                         <  3:316641/148‑1 (MQ=255)
                                                                               aGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTAACTGTCAGGATTAGGGGTAAAGGTGGTAAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgtt                                                                        >  6:290638/1‑148 (MQ=255)
                                                                                gTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGa                                                                      <  6:72326/149‑1 (MQ=255)
                                                                                 ttGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAg                                                                     <  7:20471/149‑1 (MQ=255)
                                                                                 ttGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAg                                                                     >  7:39155/1‑149 (MQ=255)
                                                                                   gAGTGGTCATGCTCAAATCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCATTTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGt                                                                    <  1:298843/148‑1 (MQ=255)
                                                                                   gAGTGCTCATGCGAAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTAAACTGTCAGGATTAGGGGTAAAGGTGGGCAGTTTCGCGGTGGTGCTGACGACCTGACGTAAATCATCCACATTGTTGAg                                                                     <  4:266744/147‑1 (MQ=255)
                                                                                       ggTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATc                                                               <  4:329676/149‑1 (MQ=255)
                                                                                        gTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATcc                                                              <  5:147663/149‑1 (MQ=255)
                                                                                        gTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATc                                                               <  5:101904/148‑1 (MQ=255)
                                                                                        gTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATc                                                               <  2:246244/148‑1 (MQ=255)
                                                                                            tGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCgg                                                                                                             <  4:158097/98‑1 (MQ=255)
                                                                                            tGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCgg                                                                                                             >  3:158097/1‑98 (MQ=255)
                                                                                            tGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCg                                                          >  7:49092/1‑149 (MQ=255)
                                                                                               gcAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCa                                                       <  8:226357/149‑1 (MQ=255)
                                                                                               gcAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCACGATTAGGGGTAAAGGTGGTCAGAATCGCGGTGGTGCTGACGACCTGCCGGAAAACATCCACATTGTTGAGTTCATCCAGCGTCa                                                       >  2:189421/1‑149 (MQ=255)
                                                                                                 aaaGCTCCTTTTTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTAGCGTTGGTGCTGACGACATGACGGAAATCATCCACATTGTTGAGTTCATCGAGCGTCAt                                                      >  3:296295/1‑148 (MQ=255)
                                                                                                 aaaGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCTCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTACATCCAGCGTCAt                                                      >  3:267351/1‑148 (MQ=255)
                                                                                                     cTCCTTTGGCTGTCGTGTAGAGTGTATCTGCGCCACATAGTGGGCAATTTCACTGGCGGGCTTCGGGGTAAAGGTGGGCAGACTCGCGGGGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACt                                                 <  2:79163/149‑1 (MQ=255)
                                                                                                        cTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGa                                              <  8:39155/149‑1 (MQ=255)
                                                                                                        cTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGa                                              <  2:19646/149‑1 (MQ=255)
                                                                                                          ttGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATttcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtggggattgatgtcgag                                            <  8:166334‑M2/149‑107 (MQ=255)
                                                                                                            gtctgtcGGGTAGAGTGAATCTGCGCCCCATAGTGGGCAATGTCACTGTCAGCATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCGGTCGACCTTACGGAAATCATCCCCATGGTTTCGTTCATCCCGCGGCATTAACTGGAGGcc                                          >  6:281757/1‑149 (MQ=255)
                                                                                                             tctgtcGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCg                                         <  3:282360/149‑1 (MQ=255)
                                                                                                                 tcGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGata                                      <  5:370059/148‑1 (MQ=255)
                                                                                                                 tcGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGa                                        <  5:89193/146‑1 (MQ=255)
                                                                                                                 tcGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGa                                        <  8:262813/146‑1 (MQ=255)
                                                                                                                    tgtAGAGTGAATCTGCGCCACATAGTGGGCAATttcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtgggga                                                       <  4:336365‑M2/128‑96 (MQ=255)
                                                                                                                    tgtAGAGTGAATCTGCGCCACATAGTGGGCAATttcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtgggga                                                       >  3:336365‑M2/1‑33 (MQ=255)
                                                                                                                    tgtAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGc                                  >  3:295256/1‑149 (MQ=255)
                                                                                                                         agTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGGCGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAAc                                                  <  3:221466/128‑1 (MQ=255)
                                                                                                                         agTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGGCGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAAc                                                  >  4:221466/1‑128 (MQ=255)
                                                                                                                         agTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGc                             <  8:347032/149‑1 (MQ=255)
                                                                                                                          gTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCg                            <  3:266133/149‑1 (MQ=255)
                                                                                                                          gTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCg                            <  3:74589/149‑1 (MQ=255)
                                                                                                                           tGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGt                           >  7:69136/1‑149 (MQ=255)
                                                                                                                             aaTCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGATGACGACATGACGGAACTCATCCACATTGTTGAGTTCATCCAGAGTCATTAACTGGATGCCGATATTGCCGAGCGTCg                         <  4:246310/149‑1 (MQ=255)
                                                                                                                              aTCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGa                        <  3:335613/149‑1 (MQ=255)
                                                                                                                              aTCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGGGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGa                        <  4:249605/149‑1 (MQ=255)
                                                                                                                                  gcgcCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGAGGCt                    >  1:43508/1‑149 (MQ=255)
                                                                                                                                    gcCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGAGGCTTc                  <  7:330263/149‑1 (MQ=255)
                                                                                                                                    gcCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGAGGCTTc                  <  5:143299/149‑1 (MQ=255)
                                                                                                                                      cacaTAGTGGGCAATttcactctacacgacagacaaaggagctttgcgcatgaccactcaactggaacaggcctgggagctagcgaaacagcgtttcgcggcggtggggattgatgtcgaggaggcgctgcgccaacttgatcgtttac                >  7:166334‑M2/1‑15 (MQ=255)
                                                                                                                                      cacaTAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGAGGCTTCaa                >  7:386753/1‑149 (MQ=255)
                                                                                                                                        caTAGTGGTAATTTTAACTTTAATGATTAGGTTTAAAGGTGTTCATATTCTCGTTTGTTCTGACGAACTGACGGAAATCATCAACATTTTTGAGTTCATACAGCTTAATTACCTGGATGCCTATATTGCCGAGCGTCGAGGCTTCAACa              <  4:296295/149‑1 (MQ=255)
                                                                                                                                           aGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGAGGCTTCAACAGGc           >  1:406084/1‑149 (MQ=255)
                                                                                                                                               ggCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCCCATTGGTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATAGCCGAGCGTCGAGGCTTCAACAGGCCCgg       >  2:103246/1‑149 (MQ=255)
                                                                                                                                                   aTTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGa                        >  3:375685/1‑128 (MQ=255)
                                                                                                                                                   aTTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGa                        <  4:375685/128‑1 (MQ=255)
                                                                                                                                                    tttCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGAGGCTTCAACAGGCCCGGCGATc  <  8:317863/149‑1 (MQ=255)
                                                                                                                                                    tttCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGAGGCTTCAACAGGCCCGGCGATc  >  4:282308/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
ATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGAGCGTCGAGGCTTCAACAGGCCCGGCGATC  >  NC_000913/4095890‑4096186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.