Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 2,867,796 IS1 (+) +9 bp 22.9% coding (950‑958/1140 nt) nlpD ← activator of AmiC murein hydrolase activity, lipoprotein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 291401NA (NA)13 (0.140) 12/266 NT 18.3% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 2867804 54 (0.640)coding (950/1140 nt) nlpD activator of AmiC murein hydrolase activity, lipoprotein
* ? NC_000913 2867796 =54 (0.640)19 (0.210) 18/266 NT 24.7% coding (958/1140 nt) nlpD activator of AmiC murein hydrolase activity, lipoprotein
?NC_000913 = 3584195 NA (NA)noncoding (768/768 nt) IS1 repeat region

Only 100 of 104 total aligned reads displayed.

CTTGTAACGAATTTCAAAATGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCTTGTTGCCCCCCTCAGAAGCGCCAAAGGTTTCGATCAC  >  NC_000913/2867656‑2867952
                                                                                                                                                    |                                                                                                                                                    
cTTGTAACGAATTTCAAAATGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGtt                                                                                                                                                      <  3:246646/149‑1 (MQ=255)
cTTGTAACGAATTTCAAAATGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGtt                                                                                                                                                      >  3:149226/1‑149 (MQ=255)
    tAACGAATTTCAAAATGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTtgat                                                                                                                                                  >  5:255009/1‑149 (MQ=255)
    tAACGAATTTCAAAATGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTtgat                                                                                                                                                  >  5:3961/1‑149 (MQ=255)
    tAACGAATTTCAAAATGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCACGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTtgat                                                                                                                                                  >  3:277134/1‑149 (MQ=255)
    tAACGAATTTCAAAATGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCACGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTtgat                                                                                                                                                  <  4:277134/149‑1 (MQ=255)
    aaacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagttgcatgacaaagtcatcgggcaatatctgaacataaaacactaacaataagttggagtcattaccCATTATGTTtgat                                                                                                                                                  <  1:148702‑M1/13‑1 (MQ=255)
      aCGAATTTCAAAATGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTggtga                                                                                                                                                 >  5:315351‑M2/1‑143 (MQ=255)
        gAATTTCAAAATGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTtgat                                                                                                                                                  <  1:107094/145‑1 (MQ=255)
        gAATTTCAAAATGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTtgat                                                                                                                                                  >  2:107094/1‑145 (MQ=255)
         aaTTTCAAAATGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGTCACTCAGGTAATCATCATTATGTTTGATGATaa                                                                                                                                             <  7:297822/149‑1 (MQ=255)
               aaaaTGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCATGTAATCATCATTATGTTTGATGATAATCAGAt                                                                                                                                       <  5:98566/149‑1 (MQ=255)
               aaaaTGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGATATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTggtgatgctgccaa                                                                                                                                        >  1:221276‑M2/1‑134 (MQ=255)
                 aggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTa                                                                                                                                     >  6:352686‑M1/124‑149 (MQ=255)
                    gCAAGCGTGTTGAACTCGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCg                                                                                                                                  >  1:127303/1‑149 (MQ=255)
                       aGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAg                                                                                                                               <  6:3961/149‑1 (MQ=255)
                       aGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAg                                                                                                                               <  4:172639/149‑1 (MQ=255)
                          gtgtTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCcg                                                                                                                            >  3:223405/1‑149 (MQ=255)
                          ctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCcg                                                                                                                            <  4:345590‑M1/35‑1 (MQ=255)
                           tgtTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCcgc                                                                                                                           >  5:139061/1‑149 (MQ=255)
                              tGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGGCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCa                                                                                                                        <  8:131089/149‑1 (MQ=255)
                                aaCTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAgc                                                                                                                      >  7:89587/1‑149 (MQ=255)
                                      ttCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTggtgatgctgccaacttactgatttagtgtatgatggt                                                                                                                <  7:43068‑M2/149‑39 (MQ=255)
                                       gacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTAc                                                                                                               >  4:218844‑M1/102‑149 (MQ=255)
                                         cGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTAcc                                                                                                              <  8:324462/148‑1 (MQ=255)
                                           gTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAg                                                                                                            >  2:357220/1‑148 (MQ=255)
                                            tGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTagtgatgctgccaacttactgatttagtgtatgatggtgttttt                                                                                                          >  4:144217‑M2/1‑105 (MQ=255)
                                                aCCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg                                                                                                      <  7:79864‑M2/149‑49 (MQ=255)
                                                aCCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg                                                                                                      <  6:27598‑M2/149‑49 (MQ=255)
                                                  ccATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAaac                                                                                                     >  4:385356/1‑148 (MQ=255)
                                                    aTGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAaacaac                                                                                                  >  5:110684/1‑149 (MQ=255)
                                                       gTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAAcgcg                                                                                               >  3:328539/1‑149 (MQ=255)
                                                        ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCgg                                                                                              <  4:367886‑M1/65‑1 (MQ=255)
                                                          gCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGc                                                                                             >  6:267664/1‑148 (MQ=255)
                                                           tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTa                                                                                                                >  7:22496‑M1/82‑128 (MQ=255)
                                                           tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTa                                                                                                                <  8:22496‑M1/47‑1 (MQ=255)
                                                            tATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCAt                                                                                          >  5:18656/1‑149 (MQ=255)
                                                             aaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATc                                                                                         <  5:311458‑M1/70‑1 (MQ=255)
                                                              ttttttGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGTCTTAGGCACTCAGGTAATCATCATTATGTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtactccagtggctt                                                                                        >  4:157998‑M2/1‑87 (MQ=255)
                                                              ttttttGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCAt                                                                                          <  8:69530/147‑1 (MQ=255)
                                                                ttttGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGc                                                                                      >  2:217801/1‑149 (MQ=255)
                                                                 tttGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGc                                                                                      <  4:328539/148‑1 (MQ=255)
                                                                   tGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt                                                                                    >  8:43068‑M2/1‑82 (MQ=255)
                                                                      cccGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttga                                                                                                        <  3:382933‑M2/125‑47 (MQ=255)
                                                                           cTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATaa                                                                           >  5:18130/1‑149 (MQ=255)
                                                                            ttAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAAt                                                                          >  1:290267/1‑149 (MQ=255)
                                                                             catgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATaa                                                                           >  5:181631‑M1/64‑147 (MQ=255)
                                                                              aaCTTCTTGTTGTTCCCGGCCCAGCATTGTGTCGGTATGGGCGTAGGCACTGAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCCTCTGCGGTCGCGATAATTg                                                                        >  5:121099/1‑149 (MQ=255)
                                                                              aaCTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAAtt                                                                         <  4:294313/148‑1 (MQ=255)
                                                                              aaCTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAAt                                                                          <  6:24398/147‑1 (MQ=255)
                                                                              aaCTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAAt                                                                          <  8:344572/147‑1 (MQ=255)
                                                                                 ttcttGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTTCCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCCGTCGCGATAATTGCCt                                                                     >  1:259605/1‑149 (MQ=255)
                                                                                 acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCt                                                                     >  1:208278‑M1/60‑149 (MQ=255)
                                                                                  tcttGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGt                                                                                   <  8:366429/134‑1 (MQ=255)
                                                                                  tcttGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGt                                                                                   >  7:366429/1‑134 (MQ=255)
                                                                                   cttGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCCTAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCt                                                                     <  3:35170/147‑1 (MQ=255)
                                                                                      gttgttCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTc                                                                  <  6:18656/147‑1 (MQ=255)
                                                                                      gttgttCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCt                                                                >  2:91210/1‑149 (MQ=255)
                                                                                       ttgttCCCGGACCAGCATTGTGTCGTTCTGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCtt                                                               <  1:61707/149‑1 (MQ=255)
                                                                                        catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCttt                                                              <  1:324775‑M1/97‑1 (MQ=255)
                                                                                         atcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCttt                                                              >  3:367886‑M1/52‑148 (MQ=255)
                                                                                          ttCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt                                                             <  4:375920‑M2/148‑90 (MQ=255)
                                                                                           tCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTtgct                                                           >  1:41091/1‑149 (MQ=255)
                                                                                            cccGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTtgct                                                           <  6:255009/148‑1 (MQ=255)
                                                                                                gACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGctgcctg                                                      <  6:139061/149‑1 (MQ=255)
                                                                                                 aCCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGctgcctgc                                                     <  7:72126/149‑1 (MQ=255)
                                                                                                    tctgaacataaaacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGa                                                   <  8:125951‑M1/108‑1 (MQ=255)
                                                                                                    aGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGat                                                  <  7:90390/149‑1 (MQ=255)
                                                                                                      tgaacataaaacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGatat                                                <  1:31062‑M1/111‑1 (MQ=255)
                                                                                                      cATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTGGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGatat                                                <  6:224478/149‑1 (MQ=255)
                                                                                                        ttGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGc                                                                       <  8:383728/124‑1 (MQ=255)
                                                                                                        ttGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGc                                                                       >  7:383728/1‑124 (MQ=255)
                                                                                                        ttGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCa                                              <  6:110684/149‑1 (MQ=255)
                                                                                                               gTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCt                                       <  6:18130/149‑1 (MQ=255)
                                                                                                               gTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCt                                       >  2:406784/1‑149 (MQ=255)
                                                                                                               gTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGAGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCt                                       >  3:303897/1‑149 (MQ=255)
                                                                                                               aacactatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCt                                       >  2:324775‑M1/30‑149 (MQ=255)
                                                                                                                  actatcaataagttggagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCttgt                                    >  7:125951‑M1/27‑149 (MQ=255)
                                                                                                                   tGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCttgtt                                   <  3:385356/149‑1 (MQ=255)
                                                                                                                   tGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCttgt                                    <  1:357220/148‑1 (MQ=255)
                                                                                                                   tGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCttgt                                    <  3:259489/148‑1 (MQ=255)
                                                                                                                   tGGGCGTAGGCACTCAGGTAATCAACATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCttgtt                                   >  8:304600/1‑149 (MQ=255)
                                                                                                                    gggCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCttgtt                                   <  4:223405/148‑1 (MQ=255)
                                                                                                                     ggCGTAGGCACTCAGGTAATCATCATTATGTTggtgaggctgccaacttactgatttagtgtatgatggtgttttagaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacgg                                 >  5:27598‑M2/1‑32 (MQ=255)
                                                                                                                      gCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCGGCGATATCAATCCCCTTGTTGcc                                >  1:352528/1‑149 (MQ=255)
                                                                                                                               cTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCTTGTTGCCCCCCTCAg                        >  1:5819/1‑148 (MQ=255)
                                                                                                                                tCAGGTAATCATCATTATGTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccc                                                                    <  8:142031‑M2/103‑83 (MQ=255)
                                                                                                                                tCAGGTAATCATCATTATGTTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccc                                                                    >  7:142031‑M2/1‑21 (MQ=255)
                                                                                                                                tCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAAcg                                                                                                 >  7:282473/1‑74 (MQ=255)
                                                                                                                                tCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAAcg                                                                                                 <  8:282473/74‑1 (MQ=255)
                                                                                                                                 gagtcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCATTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCTTGTTGCCCCCCTCAGaa                      >  3:345590‑M1/12‑148 (MQ=255)
                                                                                                                                    tcattaccCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGTCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCTTGTTGCCCCCCTCAGAAgcgc                  >  2:148702‑M1/9‑149 (MQ=255)
                                                                                                                                        tcatcaTTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCTTGTTGCCCCCCTCAGAAGCGCCaaa              <  1:91210/149‑1 (MQ=255)
                                                                                                                                        tcatcaTTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCTTGTTGCCCCCCTCAGAAGCGCCa                >  5:49674/1‑147 (MQ=255)
                                                                                                                                          atcatTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCAACTGCGGTCGCGATAATTGCCTGTCCTATGCTGCCTGCGATATCACTCCCCTTGTTGCCCACCACAGCAGCGCCAAAgc            >  2:271925/1‑148 (MQ=255)
                                                                                                                                           tcatTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTAACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCTTCTTGCACCCCTCAGAAGCGCCAAAGGt           >  3:292261/1‑149 (MQ=255)
                                                                                                                                            catTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCTTGTTGCCCCCCTCAGAAGCGCCAAAGGtt          >  3:115043/1‑149 (MQ=255)
                                                                                                                                             atTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCTTGTTGCCCCCCTCAGAAGCGCCAAAGGttt         >  1:53000/1‑149 (MQ=255)
                                                                                                                                              ttATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCTTGTTGCCCCCCTCAGAAGCGCCAAAGGTTTc        >  8:71964/1‑149 (MQ=255)
                                                                                                                                                    ttGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGCCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCTTGTTGCCCCCCTCAGAAGCGCCAAAGGTTTCGATCAc  >  4:329709/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CTTGTAACGAATTTCAAAATGCAAGCGTGTTGAACTGGTTCCGGTGCTACCCATGGTCGCTATTTTTTGCCCCGCCTTAACTTCTTGTTGTTCCCGGACCAGCATTGTGTCGTTATGGGCGTAGGCACTCAGGTAATCATCATTATGTTTGATGATAATCAGATTACCGTAGCCGCGCAGCGCGTTACCAGCATAAACAACGCGGCCATCTGCGGTCGCGATAATTGCCTGTCCTTTGCTGCCTGCGATATCAATCCCCTTGTTGCCCCCCTCAGAAGCGCCAAAGGTTTCGATCAC  >  NC_000913/2867656‑2867952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.